RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 VEPH1Q14D04 833 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 SLC39A12Q504Y0 691 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 ARMCX5Q6P1M9 558 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 DSTYKQ6XUX3 929 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 CYP2U1Q7Z449 544 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 MAB21L3Q8N8X9 362 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 NECAB1Q8N987 351 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 SENP8Q96LD8 212 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 SEPT5Q99719 369 aaPredicted RBP12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 NTPCRQ9BSD7 190 aaKnown RBP12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 RUSC1Q9BVN2 902 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 PLEKHA5Q9HAU0 1116 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 UBQLN1Q9UMX0 589 aaKnown RBP12.61□□□□□ -0.39
PCYT1A-213ENST00000460827 TCHHQ07283 1943 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 MYOFQ9NZM1 2061 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 SFI1A8K8P3 1242 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 F11P03951 625 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 CLTAP09496 248 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 AVPR1AP37288 418 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 TNFSF9P41273 254 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 NLRP12P59046 1061 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 BFSP1Q12934 665 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 ZNF174Q15697 407 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 MGAT5BQ3V5L5 792 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 TXNDC8Q6A555 127 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 RASSF3Q86WH2 238 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 ACDQ96AP0 544 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
PCYT1A-213ENST00000460827 SPAARA0A1B0GVQ0 90 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ANTXRLA6NF34 631 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 E9PMD0 336 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 CLDN3O15551 220 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 FAM189A1O60320 539 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 JAK2O60674 1132 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 CYP11A1P05108 521 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ADRB2P07550 413 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ODC1P11926 461 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 PDGFRLQ15198 375 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 SOWAHCQ53LP3 525 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 RINT1Q6NUQ1 792 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ZPBP2Q6X784 338 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 C4orf32Q8N8J7 132 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 TSTD1Q8NFU3 115 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 DRC1Q96MC2 740 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 C17orf75Q9HAS0 396 aa12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 EVLQ9UI08 416 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-213ENST00000460827 PLXNB3Q9ULL4 1909 aa12.58□□□□□ -0.39
PCYT1A-213ENST00000460827 HAPLN1P10915 354 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 DDX6P26196 483 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 DHPSP49366 369 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 STRN3Q13033 797 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 SEMA3BQ13214 749 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 ORC2Q13416 577 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 TAF12Q16514 161 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 ME3Q16798 604 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 CC2D1AQ6P1N0 951 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 KCNK18Q7Z418 384 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 MON1AQ86VX9 555 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 PROSER1Q86XN7 944 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 SPIRE2Q8WWL2 714 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 PIGKQ92643 395 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 CD101Q93033 1021 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 COL26A1Q96A83 441 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 CNOT6LQ96LI5 555 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 LRWD1Q9UFC0 647 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 KNTC1P50748 2209 aa12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-213ENST00000460827 MGAQ8IWI9 3026 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms