RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 KDF1Q8NAX2 398 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 CXorf38Q8TB03 319 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 GAB3Q8WWW8 586 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 ZSWIM3Q96MP5 696 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 CBWD1Q9BRT8 395 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 ASB7Q9H672 318 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 CYP4F11Q9HBI6 524 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 ASAH2Q9NR71 780 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 OBP2AQ9NY56 170 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 TUBGCP4Q9UGJ1 667 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 AFF4Q9UHB7 1163 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 DERAQ9Y315 318 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 C2CD2Q9Y426 696 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 TSC2P49815 1807 aa14.76□□□□□ -0.05
SCAMP4-206ENST00000460767 HEPACAM2A8MVW5 462 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 KCNK5O95279 499 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 CTHP32929 405 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 ANP32AP39687 249 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 ACOT2P49753 483 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 FAM160A1Q05DH4 1040 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 PSMD2Q13200 908 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 KCNB1Q14721 858 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 KMT5BQ4FZB7 885 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 STPG1Q5TH74 334 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 SPATA1Q5VX52 437 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 Q6ZS52 159 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 CEP68Q76N32 757 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 TMEM130Q8N3G9 435 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 CSGALNACT1Q8TDX6 532 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 ZC3H10Q96K80 434 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 ZNF512Q96ME7 567 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 TIGD1Q96MW7 591 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 CEP72Q9P209 647 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 FBXL5Q9UKA1 691 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 SPAG17Q6Q759 2223 aa14.75□□□□□ -0.05
SCAMP4-206ENST00000460767 ANO9A1A5B4 782 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 TMEM8BA6NDV4 472 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 KIAA0391O15091 583 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 EXTL3O43909 919 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 VIPR2P41587 438 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 MCCD1P59942 119 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 COL9A2Q14055 689 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 ACAP1Q15027 740 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 SF3A2Q15428 464 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 ZNF280DQ6N043 979 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 UNQ6494/PRO21346Q6UXR6 183 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 STXBP4Q6ZWJ1 553 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 BRSK2Q8IWQ3 736 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 EFCAB13Q8IY85 973 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 POMGNT1Q8WZA1 660 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 LRRC3Q9BY71 257 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 KCTD10Q9H3F6 313 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 RPF1Q9H9Y2 349 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 AGPAT3Q9NRZ7 376 aa14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 RBM12Q9NTZ6 932 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 UBQLN1Q9UMX0 589 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-206ENST00000460767 EML5Q05BV3 1969 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 CNOT1A5YKK6 2376 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 I3L4J1 428 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 PODXLO00592 558 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 PIRO00625 290 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 GADD45BO75293 160 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 RPN1P04843 607 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 NFICP08651 508 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 WEE1P30291 646 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 PPP2R3AQ06190 1150 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 KNOP1Q1ED39 458 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 ARHGAP29Q52LW3 1261 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 JADE1Q6IE81 842 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 TXNDC11Q6PKC3 985 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 NT5DC4Q86YG4 428 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 TMC8Q8IU68 726 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 SHKBP1Q8TBC3 707 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 SUSD3Q96L08 255 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 OXCT2Q9BYC2 517 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 SLC39A2Q9NP94 309 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 RXFP3Q9NSD7 469 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 DMAC2Q9NW81 257 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 CGNQ9P2M7 1197 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 WASF3Q9UPY6 502 aa14.73□□□□□ -0.05
SCAMP4-206ENST00000460767 SLC38A8A6NNN8 435 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 M0QZQ0 153 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 RPP40O75818 363 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 LDHAP00338 332 aaKnown RBP14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 KCNA4P22459 653 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 KPNA1P52294 538 aaPredicted RBP14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 SPAG1Q07617 926 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 TWF1Q12792 350 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 PLD1Q13393 1074 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 TEAD2Q15562 447 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 ZCWPW2Q504Y3 356 aa14.72□□□□□ -0.05
SCAMP4-206ENST00000460767 COBLL1Q53SF7 1204 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms