RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 LONP2Q86WA8 852 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 FAM160A2Q8N612 972 aaPredicted RBP11.78□□□□□ -0.52
VAMP7-203ENST00000460621 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 NME7Q9Y5B8 376 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 PTPRJQ12913 1337 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 OBSL1O75147 1896 aa11.78□□□□□ -0.52
VAMP7-203ENST00000460621 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
VAMP7-203ENST00000460621 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 SLC30A4O14863 429 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 ATP2C2O75185 946 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 FGF19O95750 216 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 ITGB3P05106 788 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 PAX3P23760 479 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 CDC25CP30307 473 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 HOXA6P31267 233 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 HOXD13P35453 343 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 MCM2P49736 904 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 GALK1P51570 392 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 ZXDBP98169 803 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 RUNX3Q13761 415 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 LRRC32Q14392 662 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 L1TD1Q5T7N2 865 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 LMBRD2Q68DH5 695 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 MON1AQ86VX9 555 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 WDR5BQ86VZ2 330 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 METTL23Q86XA0 190 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 SPPL2BQ8TCT7 592 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 MSANTD3Q96H12 275 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 RTKNQ9BST9 563 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 PCIF1Q9H4Z3 704 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 GTF3C4Q9UKN8 822 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 DSEQ9UL01 958 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
VAMP7-203ENST00000460621 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
VAMP7-203ENST00000460621 TCHHQ07283 1943 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 TRDMT1O14717 391 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 GABRDO14764 452 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 NOL4O94818 638 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 LMO2P25791 158 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 CSRP2Q16527 193 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 SV2CQ496J9 727 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 KBTBD6Q86V97 674 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 OR5B17Q8NGF7 314 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 SMOC1Q9H4F8 434 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 MRPL44Q9H9J2 332 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 TDP1Q9NUW8 608 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 GCNT4Q9P109 453 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
VAMP7-203ENST00000460621 EML5Q05BV3 1969 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
VAMP7-203ENST00000460621 VPS37CA5D8V6 355 aaPredicted RBP11.75□□□□□ -0.53
VAMP7-203ENST00000460621 TM4SF5O14894 197 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 AXIN1O15169 862 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 IL18RAPO95256 599 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 BMP15O95972 392 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 ADRB1P08588 477 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 GJA4P35212 333 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 POSTNQ15063 836 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 SF3A2Q15428 464 aaKnown RBP11.75□□□□□ -0.53
VAMP7-203ENST00000460621 SOWAHAQ2M3V2 549 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 FAM171BQ6P995 826 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 C1orf228Q6PIY5 440 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 NT5DC4Q86YG4 428 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 DCP1BQ8IZD4 617 aaKnown RBP11.75□□□□□ -0.53
VAMP7-203ENST00000460621 SYNPOQ8N3V7 929 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
VAMP7-203ENST00000460621 KBTBD7Q8WVZ9 684 aa11.75□□□□□ -0.53
VAMP7-203ENST00000460621 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms