RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 KLHL30Q0D2K2 578 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 BMS1Q14692 1282 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 PTPN14Q15678 1187 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 PSMD5Q16401 504 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 SGO2Q562F6 1265 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 SPRED2Q7Z698 418 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 TMTC1Q8IUR5 882 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 ZNF606Q8WXB4 792 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 TFAP2BQ92481 460 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 DDX1Q92499 740 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 B3GALT6Q96L58 329 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 DPEP3Q9H4B8 488 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 RXFP1Q9HBX9 757 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 TLR9Q9NR96 1032 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 MRPL17Q9NRX2 175 aaKnown RBP11.39□□□□□ -0.59
FN1-214ENST00000460217 FNIP2Q9P278 1114 aa11.39□□□□□ -0.59
FN1-214ENST00000460217 TMEM265A0A087WTH1 108 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 MYBPHLA2RUH7 354 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 FSCN2O14926 492 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 THAP12O43422 761 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 MED7O43513 233 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 CD19P15391 556 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 PSMC1P62191 440 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 CDR2Q01850 454 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 ORC1Q13415 861 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 CNGA2Q16280 664 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 NFE2Q16621 373 aaPredicted RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 LCLAT1Q6UWP7 414 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 CYP26C1Q6V0L0 522 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 LRRTM3Q86VH5 581 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 DCP1BQ8IZD4 617 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 C12orf29Q8N999 325 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 OLIG1Q8TAK6 271 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 POF1BQ8WVV4 589 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 PCED1BQ96HM7 432 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 BAG1Q99933 345 aaPredicted RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 TCF25Q9BQ70 676 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 CLSTN3Q9BQT9 956 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 ZSWIM1Q9BR11 485 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 HAUS4Q9H6D7 363 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 ABCB6Q9NP58 842 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 NGRNQ9NPE2 291 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 ACP6Q9NPH0 428 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 MTUS1Q9ULD2 1270 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
FN1-214ENST00000460217 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.38□□□□□ -0.59
FN1-214ENST00000460217 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 LAMA2P24043 3122 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 MTCL1Q9Y4B5 1905 aaKnown RBP11.38□□□□□ -0.59
FN1-214ENST00000460217 COL4A4P53420 1690 aaPredicted RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 GRM6O15303 877 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 ATP2C2O75185 946 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 LSM8O95777 96 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 C1RP00736 705 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 SKILP12757 684 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 CHRNB2P17787 502 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 DNAJB1P25685 340 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 NDUFV1P49821 464 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 ERVFC1P60507 584 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 FMO1Q01740 532 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 GPR17Q13304 367 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 GPM6BQ13491 265 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 CAMK1Q14012 370 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 SMC1AQ14683 1233 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 TDRD12Q587J7 1177 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 TPGS2Q68CL5 300 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 PRSS55Q6UWB4 352 aaPredicted RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 RSPO2Q6UXX9 243 aaPredicted RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 TRIM72Q6ZMU5 477 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 C4orf50Q6ZRC1 276 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 ZNF571Q7Z3V5 609 aaPredicted RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 TMC7Q7Z402 723 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 VPS36Q86VN1 386 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 CCDC170Q8IYT3 715 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 MRPL43Q8N983 215 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
FN1-214ENST00000460217 SLC20A1Q8WUM9 679 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 CYFIP2Q96F07 1278 aa11.37□□□□□ -0.59
FN1-214ENST00000460217 FUBP3Q96I24 572 aaKnown RBP eCLIP11.37□□□□□ -0.59
FN1-214ENST00000460217 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms