RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	MYEOV	Q96EZ4	313 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	SLC46A1	Q96NT5	459 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	TTYH3	Q9C0H2	523 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	NRDE2	Q9H7Z3	1164 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	GALNT9	Q9HCQ5	603 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	TMEM74B	Q9NUR3	256 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	PNMA2	Q9UL42	364 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	PHTF1	Q9UMS5	762 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	FZD1	Q9UP38	647 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	RAD54B	Q9Y620	910 aa		4.09	□□□□□ -1.75
VPS8-215	ENST00000460158	CENPVL1	A0A0U1RR11	272 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	MYO1C	O00159	1063 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	WDHD1	O75717	1129 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	SPDEF	O95238	335 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	PAX3	P23760	479 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	GCLC	P48506	637 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	ANXA11	P50995	505 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	ZNF134	P52741	427 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	RPS16	P62249	146 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	FPGS	Q05932	587 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	IFIT5	Q13325	482 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	TP53BP2	Q13625	1128 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	DYRK1A	Q13627	763 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	RAB32	Q13637	225 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	UBE4A	Q14139	1066 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	LONRF1	Q17RB8	773 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	WDR78	Q5VTH9	848 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	IGFL4	Q6B9Z1	124 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	RHOU	Q7L0Q8	258 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	C11orf96	Q7Z7L8	435 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	CNPY4	Q8N129	248 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	NME8	Q8N427	588 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	OR56A3	Q8NH54	315 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	HAS1	Q92839	578 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	LENG9	Q96B70	501 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	MLST8	Q9BVC4	326 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	ZNF518B	Q9C0D4	1074 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	UNKL	Q9H9P5	680 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	ANKFY1	Q9P2R3	1169 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	C11orf21	Q9P2W6	132 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	REXO2	Q9Y3B8	237 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	NEU2	Q9Y3R4	380 aa		4.08	□□□□□ -1.76
VPS8-215	ENST00000460158	MYADML2	A6NDP7	307 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158		E7ENX8	843 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	FOS	P01100	380 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	RPL17	P18621	184 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	GATA3	P23771	443 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	PTGS2	P35354	604 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	VIPR2	P41587	438 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	ALDH5A1	P51649	535 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	CASP5	P51878	434 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	VAV2	P52735	878 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	INHBE	P58166	350 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	LILRA4	P59901	499 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	RPS7	P62081	194 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	GUCY1B3	Q02153	619 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	TAP2	Q03519	686 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	DPT	Q07507	201 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	ZNF543	Q08ER8	600 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	SCAP	Q12770	1279 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	FOXD4	Q12950	439 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	OS9	Q13438	667 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	IQCB1	Q15051	598 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	PREPL	Q4J6C6	727 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	SLC44A4	Q53GD3	710 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	DCAF12L1	Q5VU92	463 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	ARMC6	Q6NXE6	501 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	MRGPRE	Q86SM8	312 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	LIX1L	Q8IVB5	337 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	ADGRG5	Q8IZF4	528 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	SYNE4	Q8N205	404 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	PNISR	Q8TF01	805 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	RAPGEF4	Q8WZA2	1011 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	EVI5L	Q96CN4	794 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	CHFR	Q96EP1	664 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	SLC39A13	Q96H72	371 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	MSLNL	Q96KJ4	702 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	STRBP	Q96SI9	672 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	HEPH	Q9BQS7	1158 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	UNK	Q9C0B0	810 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	ZNF700	Q9H0M5	742 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	MMRN2	Q9H8L6	949 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	A1CF	Q9NQ94	594 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	FNIP2	Q9P278	1114 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	TBC1D30	Q9Y2I9	924 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	HS3ST4	Q9Y661	456 aa		4.07	□□□□□ -1.76
VPS8-215	ENST00000460158	TRGV11	A0A075B6L2	103 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	POM121B	A6NF01	834 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158		F5H697	171 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	PYCARD-AS1	I3L0S3	204 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	FOXN3	O00409	490 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	ZNF202	O95125	648 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	IFIT2	P09913	472 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	ATXN1L	P0C7T5	689 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	IL1R1	P14778	569 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	MCM7	P33993	719 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	NPTX2	P47972	431 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	TM4SF4	P48230	202 aa		4.06	□□□□□ -1.76
VPS8-215	ENST00000460158	NDUFV1	P49821	464 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms