RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TEX9Q8N6V9 391 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 ZNF614Q8N883 585 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 TFB1MQ8WVM0 346 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 APOL2Q9BQE5 337 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 RUSC1Q9BVN2 902 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 PACSIN1Q9BY11 444 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 PIH1D1Q9NWS0 290 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 WWOXQ9NZC7 414 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 RNF112Q9ULX5 631 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 TSC22D4Q9Y3Q8 395 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 CDHR2Q9BYE9 1310 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 CPSF4O95639 269 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 KLRC1P26715 233 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 LRRC34Q8IZ02 419 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 NT5C1AQ9BXI3 368 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 IARS2Q9NSE4 1012 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 CYP2C19P33261 490 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 PSMD14O00487 310 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 SLC37A4O43826 429 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 THUMPD3Q9BV44 507 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 CLASP2O75122 1294 aaKnown RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 CCDC92Q53HC0 331 aaPredicted RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 ISLR2Q6UXK2 745 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 EPB41L4AQ9HCS5 686 aaPredicted RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
SNX27-204ENST00000458013 ALG6Q9Y672 507 aa20.45■□□□□ 0.86
SNX27-204ENST00000458013 KBTBD13C9JR72 458 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 TCF3P15923 654 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 CCDC103Q8IW40 242 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 HPDLQ96IR7 371 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 PCNAP12004 261 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 COG2Q14746 738 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 NSL1Q96IY1 281 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 M0QYT0 321 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 GSNP06396 782 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 HSD17B3P37058 310 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 GEMIN4P57678 1058 aaKnown RBP20.44■□□□□ 0.86
SNX27-204ENST00000458013 HPCAP84074 193 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 CARNMT1Q8N4J0 409 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 TBC1D19Q8N5T2 526 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 TRIM49D1C9J1S8 452 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 TAF1CQ15572 869 aaPredicted RBP20.44■□□□□ 0.86
SNX27-204ENST00000458013 TRIP4Q15650 581 aaPredicted RBP20.44■□□□□ 0.86
SNX27-204ENST00000458013 MAPRE1Q15691 268 aaKnown RBP20.44■□□□□ 0.86
SNX27-204ENST00000458013 ANKRD49Q8WVL7 239 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 SMARCAD1Q9H4L7 1026 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 ZNF70Q9UC06 446 aaPredicted RBP20.44■□□□□ 0.86
SNX27-204ENST00000458013 TRADDQ15628 312 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 CENPPQ6IPU0 288 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 SP8Q8IXZ3 490 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 SEMA4DQ92854 862 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 KCNH4Q9UQ05 1017 aa20.44■□□□□ 0.86
SNX27-204ENST00000458013 RGS5O15539 181 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 GH1P01241 217 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 ZCCHC18P0CG32 403 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 PDHBP11177 359 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 SPRP35270 261 aaPredicted RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 CLEC16AQ2KHT3 1053 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 FEZF2Q8TBJ5 459 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 CPSF1Q10570 1443 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 KLC1Q07866 573 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 RCN1Q15293 331 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 ALX1Q15699 326 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 XKR3Q5GH77 459 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 AGGF1Q8N302 714 aaeCLIP20.43■□□□□ 0.86
SNX27-204ENST00000458013 USP38Q8NB14 1042 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 ECSITQ9BQ95 431 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 CEP41Q9BYV8 373 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 UBP1Q9NZI7 540 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 UVRAGQ9P2Y5 699 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 CRLS1Q9UJA2 301 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 M0R3G1 203 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 SNRPAP09012 282 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 DDX5P17844 614 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 RPS7P62081 194 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 SV2CQ496J9 727 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 PIK3R5Q8WYR1 880 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 PRPF18Q99633 342 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 VTNP04004 478 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 PYGMP11217 842 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 ITGB6P18564 788 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 TCF7P36402 384 aaPredicted RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 DAB2IPQ5VWQ8 1189 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 ARID3BQ8IVW6 561 aaPredicted RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 MOV10L1Q9BXT6 1211 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 CATSPERBQ9H7T0 1116 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 MEI4A8MW99 385 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 EXTL3O43909 919 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 USP1O94782 785 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 WEE1P30291 646 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 TRIM62Q9BVG3 475 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 PHTF1Q9UMS5 762 aa20.43■□□□□ 0.86
SNX27-204ENST00000458013 MTO1Q9Y2Z2 717 aaKnown RBP20.43■□□□□ 0.86
SNX27-204ENST00000458013 DGAT1O75907 488 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PTGER2P43116 358 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 TTC33Q6PID6 262 aaPredicted RBP20.42■□□□□ 0.86
SNX27-204ENST00000458013 USP13Q92995 863 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms