RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 CTCFP49711 727 aaPredicted RBP12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 LRRC6Q86X45 466 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 FBXO16Q8IX29 292 aaPredicted RBP12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 C4orf19Q8IY42 314 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 GMCL1P1Q8NEA9 526 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 FBXO25Q8TCJ0 367 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 ATP8B4Q8TF62 1192 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 HIST1H2AHQ96KK5 128 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 HIST1H2AJQ99878 128 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 H2AFJQ9BTM1 129 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 FUT8Q9BYC5 575 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 ABI2Q9NYB9 513 aaPredicted RBP12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
SMARCAD1-204ENST00000457823 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 PMPCBO75439 489 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 ASMTLO95671 621 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 ETFBP38117 255 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 KIAA0895Q8NCT3 520 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 TSPAN17Q96FV3 270 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SLC39A10Q9ULF5 831 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 F8VZ95 297 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 CYP2C8P10632 490 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 IL10P22301 178 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 YY1P25490 414 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 HERVK_113P62684 666 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 TRADDQ15628 312 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 Q4G0T1 1027 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SLC20A1Q8WUM9 679 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 TMA16Q96EY4 203 aaKnown RBP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 B2RBV5 119 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 PRLRP16471 622 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 MYL6P60660 151 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 PTK2BQ14289 1009 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 PAPD7Q5XG87 772 aaKnown RBP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 MPZL3Q6UWV2 235 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 MTSS1O43312 755 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SYF2O95926 243 aaKnown RBP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 FAM107AO95990 144 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 VTNP04004 478 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 AKT1P31749 480 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 VCPP55072 806 aaKnown RBP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 C10orf120Q5SQS8 335 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SLC47A2Q86VL8 602 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 KIF2BQ8N4N8 673 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 SGF29Q96ES7 293 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 PXMP2Q9NR77 195 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCAD1-204ENST00000457823 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 AIM2O14862 343 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 AP1G2O75843 785 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 MYL2P10916 166 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 CPT1AP50416 773 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 CCDC33Q8N5R6 958 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 ARMC2Q8NEN0 867 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZNF212Q9UDV6 495 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 RPS6KL1Q9Y6S9 549 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 VDRP11473 427 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 RARRES1P49788 294 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 TMED1Q13445 227 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZNF484Q5JVG2 852 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 PCNX4Q63HM2 1172 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 NAPEPLDQ6IQ20 393 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 WDR93Q6P2C0 686 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 LONP2Q86WA8 852 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 ARID3BQ8IVW6 561 aaPredicted RBP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 EMC1Q8N766 993 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 CALML6Q8TD86 181 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 ZC3H11AO75152 810 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 IRF1P10914 325 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 THPOP40225 353 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 PAN2Q504Q3 1202 aaKnown RBP12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 RFWD2Q8NHY2 731 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 LZICQ8WZA0 190 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 BHMTQ93088 406 aa12.22□□□□□ -0.45
SMARCAD1-204ENST00000457823 CEP19Q96LK0 163 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms