RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 MYL6P60660 151 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 WDR72Q3MJ13 1102 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 GUF1Q8N442 669 aaKnown RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 SHDQ96IW2 340 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 NXF1Q9UBU9 619 aaKnown RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 CDH9Q9ULB4 789 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 TRAF3IP3Q9Y228 551 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 MIA3Q5JRA6 1907 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 OBSL1O75147 1896 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 NR2F2P24468 414 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 CDC25CP30307 473 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 ATICP31939 592 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 GPR15P49685 360 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 NUBP1P53384 320 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 RPL10AP62906 217 aaKnown RBP17.36■□□□□ 0.37
CPSF6-203ENST00000456847 MLF2Q15773 248 aaPredicted RBP17.36■□□□□ 0.37
CPSF6-203ENST00000456847 CCDC142Q17RM4 750 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 ZNF699Q32M78 642 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 GPR158Q5T848 1215 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 TDRD10Q5VZ19 366 aaKnown RBP17.36■□□□□ 0.37
CPSF6-203ENST00000456847 C4orf50Q6ZRC1 276 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 OR6B3Q8NGW1 331 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 BRD9Q9H8M2 597 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 ABCB6Q9NP58 842 aa17.36■□□□□ 0.37
CPSF6-203ENST00000456847 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
CPSF6-203ENST00000456847 MAGED2Q9UNF1 606 aaPredicted RBP17.36■□□□□ 0.37
CPSF6-203ENST00000456847 TICRRQ7Z2Z1 1910 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 GALR2O43603 387 aaPredicted RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 CYP2F1P24903 491 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 CYP4F8P98187 520 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 NHLH1Q02575 133 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 SDHAF4Q5VUM1 108 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 SCN4BQ8IWT1 228 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 SMYD4Q8IYR2 804 aaPredicted RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 STKLD1Q8NE28 680 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 PKMYT1Q99640 499 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 MRPL45Q9BRJ2 306 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 DENND4CQ5VZ89 1909 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 ZNF638Q14966 1978 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 MYBPHLA2RUH7 354 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 PI15O43692 258 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 ATP2C2O75185 946 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 SMC2O95347 1197 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 STAU1O95793 577 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 CSH1P0DML2 217 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 CSH2P0DML3 217 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 LMO2P25791 158 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 VIPR2P41587 438 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 DLG4P78352 724 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 NCOA4Q13772 614 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 MAPRE1Q15691 268 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 DDR2Q16832 855 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 VITQ6UXI7 678 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 LIMS2Q7Z4I7 341 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 YAF2Q8IY57 180 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 TMC2Q8TDI7 906 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 TMEM174Q8WUU8 243 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 DEPDC1BQ8WUY9 529 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 MYLPFQ96A32 169 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 TRMT61BQ9BVS5 477 aaKnown RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
CPSF6-203ENST00000456847 PTPRDP23468 1912 aa17.35■□□□□ 0.37
CPSF6-203ENST00000456847 COL4A3Q01955 1670 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 DPYSL4O14531 572 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 KRT13P13646 458 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 GNL1P36915 607 aaPredicted RBP17.34■□□□□ 0.37
CPSF6-203ENST00000456847 CYP27A1Q02318 531 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 TCF15Q12870 199 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 NFIL3Q16649 462 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 PHLDB3Q6NSJ2 640 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 SCARA5Q6ZMJ2 495 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 FAM186BQ8IYM0 893 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 E2F7Q96AV8 911 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 FUBP3Q96I24 572 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■■■■□ 22.1
CPSF6-203ENST00000456847 MUC6Q6W4X9 2439 aa17.34■□□□□ 0.37
CPSF6-203ENST00000456847 HEPACAM2A8MVW5 462 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 TACC1O75410 805 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 C4BPAP04003 597 aaKnown RBP17.33■□□□□ 0.37
CPSF6-203ENST00000456847 PSMC3P17980 439 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 GDI1P31150 447 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 PIK3CAP42336 1068 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 VAMP7P51809 220 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 PRKCQQ04759 706 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 CFAP221Q4G0U5 840 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 MDH1BQ5I0G3 518 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 FAM171BQ6P995 826 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 TPRG1Q6ZUI0 275 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 GPIHBP1Q8IV16 184 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 ENGASEQ8NFI3 743 aa17.33■□□□□ 0.37
CPSF6-203ENST00000456847 FOXQ1Q9C009 403 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms