RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 HIF1AQ16665 826 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 FAM182AQ5T1J6 154 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 KRT39Q6A163 491 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 MFSD7Q6UXD7 560 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ISLR2Q6UXK2 745 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 RNF111Q6ZNA4 994 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 NET1Q7Z628 596 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SPATA24Q86W54 205 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ARHGAP24Q8N264 748 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 EXD1Q8NHP7 514 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 DCAKDQ8WVC6 231 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PYDC1Q8WXC3 89 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 HIC2Q96JB3 615 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 DNAJC1Q96KC8 554 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ACCSQ96QU6 501 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 MECRQ9BV79 373 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 AVENQ9NQS1 362 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 RAB20Q9NX57 234 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SAE1Q9UBE0 346 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 ATP2A1O14983 1001 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 SLC16A4O15374 487 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 ZNF862O60290 1169 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 STK10O94804 968 aaKnown RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 PABPC4LP0CB38 370 aaKnown RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 ARP10275 920 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 KITP10721 976 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 NSFP46459 744 aaKnown RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 SCNN1DP51172 638 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 DEUP1Q05D60 604 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 MAMLD1Q13495 774 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 SFT2D3Q587I9 215 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 RASSF3Q86WH2 238 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 RHPN2Q8IUC4 686 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 ST13P4Q8IZP2 240 aaPredicted RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 GSTCDQ8NEC7 633 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 DHRS4Q9BTZ2 278 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 GPRC5CQ9NQ84 441 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 PPARGC1AQ9UBK2 798 aaKnown RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 MARCOQ9UEW3 520 aaPredicted RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 NARFQ9UHQ1 456 aa10.82□□□□□ -0.68
CLIP4-208ENST00000456385 TNRC6CQ9HCJ0 1690 aaKnown RBP10.82□□□□□ -0.68
CLIP4-208ENST00000456385 SMCHD1A6NHR9 2005 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MEI4A8MW99 385 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 SGK1O00141 431 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 SORBS2O94875 1100 aaKnown RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TGDSO95455 350 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 VAV1P15498 845 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 GPC3P51654 580 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 DLG1Q12959 904 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TRMT5Q32P41 509 aaKnown RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TXNRD3NBQ6F5E7 133 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MON1BQ7L1V2 547 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 HAUS6Q7Z4H7 955 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 KCTD17Q8N5Z5 321 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 FBXO36Q8NEA4 188 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 FBXL13Q8NEE6 735 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 OR6Y1Q8NGX8 325 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MTBPQ96DY7 904 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MPP4Q96JB8 637 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 FAM81BQ96LP2 452 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 KCND2Q9NZV8 630 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 HSFX1Q9UBD0 423 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TCRBV7S3A2A0A539 114 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 ZSCAN9O15535 394 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 CIB2O75838 187 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 PGM3O95394 542 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 PENKP01210 267 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MT-ND3P03897 115 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 ASLP04424 464 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 DHRS4L1P0CG22 281 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 CACNB3P54284 484 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 AQP4P55087 323 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 GDF10P55107 478 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MAP3K10Q02779 954 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 TCP10Q12799 353 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 MSLNQ13421 630 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 CES4AQ5XG92 561 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 CDHR3Q6ZTQ4 885 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 ACAD11Q709F0 780 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
CLIP4-208ENST00000456385 PDSS2Q86YH6 399 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 STKLD1Q8NE28 680 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 DCAF4Q8WV16 495 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 OLFM3Q96PB7 478 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 SLITRK1Q96PX8 696 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 ZNF577Q9BSK1 485 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 KIFC3Q9BVG8 833 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 ACSS3Q9H6R3 686 aa10.81□□□□□ -0.68
CLIP4-208ENST00000456385 RHBDL2Q9NX52 303 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms