RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 OBP2AQ9NY56 170 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 PDXKO00764 312 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 NRG2O14511 850 aaPredicted RBP19.15■□□□□ 0.66
MSH6-207ENST00000456246 STAU1O95793 577 aaKnown RBP19.15■□□□□ 0.66
MSH6-207ENST00000456246 ATICP31939 592 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 NDUFA8P51970 172 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 C4orf50Q6ZRC1 276 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 MSANTD3Q96H12 275 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 FAM84AQ96KN4 292 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 TASP1Q9H6P5 420 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 DLGAP2Q9P1A6 1054 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 UXTQ9UBK9 157 aaPredicted RBP19.15■□□□□ 0.66
MSH6-207ENST00000456246 CDH9Q9ULB4 789 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 MIA3Q5JRA6 1907 aa19.15■□□□□ 0.66
MSH6-207ENST00000456246 NUP210Q8TEM1 1887 aaPredicted RBP19.14■□□□□ 0.65
MSH6-207ENST00000456246 SOBPA7XYQ1 873 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 HEPACAM2A8MVW5 462 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 PROB1E7EW31 1015 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 MAN2B1O00754 1011 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 ZNF263O14978 683 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 NCAM2O15394 837 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 RPN1P04843 607 aaKnown RBP19.14■□□□□ 0.65
MSH6-207ENST00000456246 GLULP15104 373 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 WARSP23381 471 aaKnown RBP19.14■□□□□ 0.65
MSH6-207ENST00000456246 DDX6P26196 483 aaKnown RBP eCLIP19.14■□□□□ 0.65
MSH6-207ENST00000456246 NBL1P41271 181 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 NUCB2P80303 420 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 TRPC3Q13507 836 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 GRM2Q14416 872 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 ANGPT1Q15389 498 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 GPR158Q5T848 1215 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 C1orf228Q6PIY5 440 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 ZNF852Q6ZMS4 543 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 SPATA2LQ8IUW3 424 aaPredicted RBP19.14■□□□□ 0.65
MSH6-207ENST00000456246 YAF2Q8IY57 180 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 FSIP1Q8NA03 581 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
MSH6-207ENST00000456246 CEP295NLQ96MC4 621 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 PKMYT1Q99640 499 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 BCO2Q9BYV7 579 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 FOXQ1Q9C009 403 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 IL21Q9HBE4 155 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 LTB4R2Q9NPC1 389 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 TMLHEQ9NVH6 421 aa19.14■□□□□ 0.65
MSH6-207ENST00000456246 DPYSL4O14531 572 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 TACC1O75410 805 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 RHOBTB3O94955 611 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 DCNP07585 359 aaKnown RBP19.13■□□□□ 0.65
MSH6-207ENST00000456246 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
MSH6-207ENST00000456246 GDI1P31150 447 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 VIPR2P41587 438 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 MAGEA11P43364 429 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 MLLT6P55198 1093 aaPredicted RBP19.13■□□□□ 0.65
MSH6-207ENST00000456246 TNNC1P63316 161 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 UBXN2BQ14CS0 331 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 FAM171BQ6P995 826 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 KRBA2Q6ZNG9 492 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 OSTM1Q86WC4 334 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 ARID3BQ8IVW6 561 aaPredicted RBP19.13■□□□□ 0.65
MSH6-207ENST00000456246 GIPC2Q8TF65 315 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 KBTBD7Q8WVZ9 684 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 MMS19Q96T76 1030 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 SYT15Q9BQS2 421 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 KCTD10Q9H3F6 313 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 FAM86C1Q9NVL1 165 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 DMAC2Q9NW81 257 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 GTF3C4Q9UKN8 822 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 F5P12259 2224 aa19.13■□□□□ 0.65
MSH6-207ENST00000456246 CHADO15335 359 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
MSH6-207ENST00000456246 PHACTR2O75167 634 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 CLDN10P78369 228 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 FCHO2Q0JRZ9 810 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 KCNB1Q14721 858 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 VSTM1Q6UX27 236 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 PARD3BQ8TEW8 1205 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 TRMT2BQ96GJ1 504 aaKnown RBP19.12■□□□□ 0.65
MSH6-207ENST00000456246 CHAMP1Q96JM3 812 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 PHOX2BQ99453 314 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 MKNK1Q9BUB5 465 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 HEBP1Q9NRV9 189 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 TRAF3IP3Q9Y228 551 aa19.12■□□□□ 0.65
MSH6-207ENST00000456246 FAM170BA6NMN3 283 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 NOL4O94818 638 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 CST3P01034 146 aaPredicted RBP19.11■□□□□ 0.65
MSH6-207ENST00000456246 NR3C1P04150 777 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 HMGA1P17096 107 aaKnown RBP19.11■□□□□ 0.65
MSH6-207ENST00000456246 DPYDQ12882 1025 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 WDR72Q3MJ13 1102 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 ARHGAP29Q52LW3 1261 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 STXBP5Q5T5C0 1151 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 SCARA3Q6AZY7 606 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 C1orf210Q8IVY1 113 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 CSGALNACT1Q8TDX6 532 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 MRPS31Q92665 395 aaKnown RBP19.11■□□□□ 0.65
MSH6-207ENST00000456246 MYRFLQ96LU7 910 aa19.11■□□□□ 0.65
MSH6-207ENST00000456246 GZF1Q9H116 711 aaPredicted RBP19.11■□□□□ 0.65
MSH6-207ENST00000456246 SNX25Q9H3E2 840 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms