RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ZCCHC9Q8N567 271 aaKnown RBP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ANKRD42Q8N9B4 389 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MGARPQ8TDB4 240 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DENND1AQ8TEH3 1009 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SHC3Q92529 594 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MAML1Q92585 1016 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KIFAP3Q92845 792 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 UTP4Q969X6 686 aaKnown RBP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRAPPC9Q96Q05 1148 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 LRRC37BQ96QE4 947 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RMDN3Q96TC7 470 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DDX23Q9BUQ8 820 aaKnown RBP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MYLK2Q9H1R3 596 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 VCXQ9H320 206 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DCLRE1BQ9H816 532 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 COL20A1Q9P218 1284 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SLC24A2Q9UI40 661 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 STK38LQ9Y2H1 464 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NEU2Q9Y3R4 380 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EMSYQ7Z589 1322 aa10.58□□□□□ -0.72
CHCHD4P3-201ENST00000455954 IGLV3-22A0A075B6J6 115 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMEM110-MUSTN1A8MSY1 372 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 C2CD2LO14523 706 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PSTPIP1O43586 416 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EDF1O60869 148 aaKnown RBP10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PSMD10O75832 226 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CABYRO75952 493 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ACSL3O95573 720 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 LINGO3P0C6S8 592 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRIM49P0CI25 452 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRIM49CP0CI26 452 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ATP4AP20648 1035 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PTPN4P29074 926 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CYP2J2P51589 502 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 BEX3Q00994 111 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ROR2Q01974 943 aaKnown RBP10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KLC1Q07866 573 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 STXBP2Q15833 593 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FSCN1Q16658 493 aaKnown RBP10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ARHGEF16Q5VV41 709 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM91A1Q658Y4 838 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 AADACL2Q6P093 401 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SLC30A9Q6PML9 568 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ANKS1BQ7Z6G8 1248 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRABD2AQ86V40 505 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SESTD1Q86VW0 696 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ZNF677Q86XU0 584 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM13CQ8NE31 585 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ZNF653Q96CK0 615 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TOX2Q96NM4 488 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ACCSQ96QU6 501 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 LBHD1Q9BQE6 289 aaPredicted RBP10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NAALADL1Q9UQQ1 740 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 LRRC37A2A6NM11 1700 aa10.57□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TCRBV7S2A1N4TA0A589 114 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 A8MUI8 341 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM86B1E9PN63 330 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EML1O00423 815 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CLTBP09497 229 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM86B2P0C5J1 330 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TXNP10599 105 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TSHRP16473 764 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MARK3P27448 753 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FOXN2P32314 431 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 GTF2H1P32780 548 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CHKAP35790 457 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ZNF76P36508 570 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 VHLP40337 213 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CETN2P41208 172 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MXI1P50539 228 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RAD23BP54727 409 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SH3BGRP55822 239 aaPredicted RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 WDR4P57081 412 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FMO1Q01740 532 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 OCRLQ01968 901 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KCNA1Q09470 495 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MPP2Q14168 576 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KYNUQ16719 465 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 UBAP2Q5T6F2 1119 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FYB2Q5VWT5 728 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CWF19L1Q69YN2 538 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ANO7Q6IWH7 933 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DRICH1Q6PGQ1 229 aaPredicted RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ANKRD33Q7Z3H0 272 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NOP9Q86U38 636 aaKnown RBP10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ARHGEF19Q8IW93 802 aa10.56□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SYCP3Q8IZU3 236 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms