RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MED7O43513 233 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 CDH5P33151 784 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 USP8P40818 1118 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 GOLGA8FQ08AF8 430 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 GOLGA8DPQ0D2H9 430 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 KLHL30Q0D2K2 578 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 GPR17Q13304 367 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 CAMK1Q14012 370 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 BMS1Q14692 1282 aaKnown RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 PSMD5Q16401 504 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 NFE2Q16621 373 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 ZNF394Q53GI3 561 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 SGO2Q562F6 1265 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 KIAA1841Q6NSI8 718 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 LCLAT1Q6UWP7 414 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 CYP26C1Q6V0L0 522 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 ACOT1Q86TX2 421 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 DCP1BQ8IZD4 617 aaKnown RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 C2orf15Q8WU43 125 aaKnown RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 RIN2Q8WYP3 895 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 TIFAQ96CG3 184 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 FUBP3Q96I24 572 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 B3GALT6Q96L58 329 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 AGPAT1Q99943 283 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 LHX5Q9H2C1 402 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 DPEP3Q9H4B8 488 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 HAUS4Q9H6D7 363 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 ABCB6Q9NP58 842 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 MRPL17Q9NRX2 175 aaKnown RBP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 NENFQ9UMX5 172 aa11.96□□□□□ -0.49
TRAF4-206ENST00000454852 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAF4-206ENST00000454852 MYBPHLA2RUH7 354 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 HCRTO43612 131 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ABLIM3O94929 683 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 LCA5LO95447 670 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 LSM8O95777 96 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 PDGFRBP09619 1106 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 GZMAP12544 262 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 CHRNB2P17787 502 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ACAT1P24752 427 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 DNAJB1P25685 340 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 FMO1Q01740 532 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 GPM6BQ13491 265 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 RAB33AQ14088 237 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 SMC1AQ14683 1233 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 TPGS2Q68CL5 300 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 RSPO2Q6UXX9 243 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 PAQR9Q6ZVX9 377 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ZNF571Q7Z3V5 609 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 LRRTM3Q86VH5 581 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 FUKQ8N0W3 1084 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 MRPL43Q8N983 215 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 SLC30A5Q8TAD4 765 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 POF1BQ8WVV4 589 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 CYFIP2Q96F07 1278 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 PCED1BQ96HM7 432 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 HEXIM2Q96MH2 286 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 CLSTN3Q9BQT9 956 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ZNF518BQ9C0D4 1074 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ALG13Q9NP73 1137 aaKnown RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ACP6Q9NPH0 428 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 TLR9Q9NR96 1032 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-206ENST00000454852 PTPRDP23468 1912 aa11.95□□□□□ -0.5
TRAF4-206ENST00000454852 ATP8B3O60423 1300 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 GRM6O15303 877 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 THAP12O43422 761 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 ATP2C2O75185 946 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CYP1A1P04798 512 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 SKILP12757 684 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CD19P15391 556 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 BRD2P25440 801 aaKnown RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 MAGEA11P43364 429 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 RPL34P49207 117 aaKnown RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 NDUFV1P49821 464 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 ERVFC1P60507 584 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 PSMC1P62191 440 aaKnown RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CCZ1BP86790 482 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 CCZ1P86791 482 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 ROR1Q01973 937 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 ARID5AQ03989 594 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 PPP1R26Q5T8A7 1209 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 PPP1R2P3Q6NXS1 205 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 PRSS55Q6UWB4 352 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-206ENST00000454852 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 VPS36Q86VN1 386 aa11.94□□□□□ -0.5
TRAF4-206ENST00000454852 C12orf29Q8N999 325 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms