RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MMS19Q96T76 1030 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
HDAC4-205ENST00000454542 PCDHB5Q9Y5E4 795 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-205ENST00000454542 GREB1Q4ZG55 1949 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 PI4K2BG5E9Z4 385 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 NRG2O14511 850 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-205ENST00000454542 LRRN2O75325 713 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 MOSPD3O75425 235 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 GNA14O95837 355 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 P4HA1P13674 534 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 CCR2P41597 374 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 MAGEA11P43364 429 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 RAP1GAPP47736 663 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 TUFMP49411 452 aaKnown RBP15.14■□□□□ 0.01
HDAC4-205ENST00000454542 PSMC1P62191 440 aaKnown RBP15.14■□□□□ 0.01
HDAC4-205ENST00000454542 SCARA5Q6ZMJ2 495 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 NPAS3Q8IXF0 933 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 ITFG1Q8TB96 612 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 PSMG2Q969U7 264 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 MYLPFQ96A32 169 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 ELMO3Q96BJ8 720 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 IMPG2Q9BZV3 1241 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 ABI2Q9NYB9 513 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-205ENST00000454542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.14■□□□□ 0.011e-12■■■■□ 23.7
HDAC4-205ENST00000454542 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 SLC27A5Q9Y2P5 690 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 ASB3Q9Y575 518 aa15.14■□□□□ 0.01
HDAC4-205ENST00000454542 NUP210Q8TEM1 1887 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-205ENST00000454542 DENND4CQ5VZ89 1909 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 DCXO43602 365 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 ATP2C2O75185 946 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 SOAT2O75908 522 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CEBPBP17676 345 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 PTPN2P17706 415 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 GNL1P36915 607 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-205ENST00000454542 ALDH1A3P47895 512 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 FMO5P49326 533 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CDH8P55286 799 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 MAPRE1Q15691 268 aaKnown RBP15.13■□□□□ 0.01
HDAC4-205ENST00000454542 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CCDC40Q4G0X9 1142 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CT47A1Q5JQC4 288 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-205ENST00000454542 TCERG1LQ5VWI1 586 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 POTEHQ6S545 545 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 C4orf50Q6ZRC1 276 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 ELMOD1Q8N336 334 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 PCED1BQ96HM7 432 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 SEPT5Q99719 369 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CORO1BQ9BR76 489 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 SNX25Q9H3E2 840 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 DPEP3Q9H4B8 488 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 FAM124BQ9H5Z6 455 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-205ENST00000454542 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CYP3A43Q9HB55 503 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 RAB20Q9NX57 234 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 HMGXB4Q9UGU5 601 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 MUTYHQ9UIF7 546 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 CDH7Q9ULB5 785 aa15.13■□□□□ 0.01
HDAC4-205ENST00000454542 ANHXE9PGG2 379 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 P4HA2O15460 535 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 LAMP2P13473 410 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 ERCC5P28715 1186 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 EPHB3P54753 998 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 HTR4Q13639 388 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 MGAT5BQ3V5L5 792 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 IQCEQ6IPM2 695 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 VSTM1Q6UX27 236 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 PDZD4Q76G19 769 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 UNC93AQ86WB7 457 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 IRF2BP1Q8IU81 584 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 HS6ST3Q8IZP7 471 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 B3GALNT2Q8NCR0 500 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 OR6B3Q8NGW1 331 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 FGF13Q92913 245 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 TCEAL4Q96EI5 215 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 ZNF512Q96ME7 567 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 LPIN3Q9BQK8 851 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 SRRTQ9BXP5 876 aaKnown RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 IL21Q9HBE4 155 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
HDAC4-205ENST00000454542 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-205ENST00000454542 A8MXQ7 604 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 CILPO75339 1184 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 PDGFRBP09619 1106 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 PTPN1P18031 435 aaKnown RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 CYP2F1P24903 491 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 GPR15P49685 360 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 MDH1BQ5I0G3 518 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 CCDC183Q5T5S1 534 aa15.11■□□□□ 0.01
HDAC4-205ENST00000454542 DNAJB7Q7Z6W7 309 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-205ENST00000454542 ITIH5Q86UX2 942 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms