RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ASB2Q96Q27 587 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 VPS16Q9H269 839 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 MKS1Q9NXB0 559 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 ELOVL5Q9NYP7 299 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 SH3BP4Q9P0V3 963 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 DKK3Q9UBP4 350 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 LIMCH1Q9UPQ0 1083 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 TMA7Q9Y2S6 64 aaKnown RBP3.04□□□□□ -1.92
LRCH3-209ENST00000452660 MRFAP1Q9Y605 127 aa3.04□□□□□ -1.92
LRCH3-209ENST00000452660 CCDC154A6NI56 674 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 PRSS29PA6NIE9 313 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 POC1B-GALNT4F8VUJ3 575 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 SOCS2O14508 198 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 OAZ2O95190 189 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 NPSP0C0P6 89 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 SNHG28P0DPA3 235 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 SFPQP23246 707 aaKnown RBP eCLIP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 TKTP29401 623 aaKnown RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 GCLCP48506 637 aaPredicted RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 TOB1P50616 345 aaPredicted RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 SNAPC2Q13487 334 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 SUPT20HL1Q3ZLR7 823 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 TMEM119Q4V9L6 283 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 C4orf46Q504U0 113 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 FAM160B1Q5W0V3 765 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 TRIM72Q6ZMU5 477 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 PARS2Q7L3T8 475 aaKnown RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 CBARPQ8N350 705 aaPredicted RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 GALNT4Q8N4A0 578 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 PPM1NQ8N819 430 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 C3orf20Q8ND61 904 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 COQ8BQ96D53 544 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 FAXDC2Q96IV6 333 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 QTRT1Q9BXR0 403 aaKnown RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 TINAGL1Q9GZM7 467 aaPredicted RBP3.03□□□□□ -1.92
LRCH3-209ENST00000452660 DUSP22Q9NRW4 184 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 ZNF580Q9UK33 172 aa3.03□□□□□ -1.92
LRCH3-209ENST00000452660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SMIM35A0A1B0GVV1 85 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 FAM90A10PA6NDY2 464 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF785A8K8V0 405 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 H3BNC9 293 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 USP1O94782 785 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 FGBP02675 491 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 GNAI2P04899 355 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 IL6RP08887 468 aaPredicted RBP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 DLDP09622 509 aaKnown RBP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 TMEM191BP0C7N4 346 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CYP2D6P10635 497 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SMARCA1P28370 1054 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 MPGP29372 298 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 PRDX5P30044 214 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CCKARP32238 428 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CYP2C18P33260 490 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF135P52742 658 aaPredicted RBP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 LOXL3P58215 753 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 DSC2Q02487 901 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SRSF1Q07955 248 aaKnown RBP eCLIP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 IL10RAQ13651 578 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CLUL1Q15846 466 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 C3orf36Q3SXR2 165 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CERKLQ49MI3 558 aaPredicted RBP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 EMC10Q5UCC4 262 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 PGM2L1Q6PCE3 622 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 ZNF813Q6ZN06 617 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 MAVSQ7Z434 540 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 CNTD1Q8N815 330 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 ATL2Q8NHH9 583 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 C16orf52Q8NHV5 167 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 COG1Q8WTW3 980 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 MOGAT1Q96PD6 335 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 THAP7Q9BT49 309 aaPredicted RBP3.02□□□□□ -1.93
LRCH3-209ENST00000452660 PTDSS2Q9BVG9 487 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SMOC2Q9H3U7 446 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SERHLQ9NQF3 203 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 SLC5A4Q9NY91 659 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 GABRQQ9UN88 632 aa3.02□□□□□ -1.93
LRCH3-209ENST00000452660 WDR17Q8IZU2 1322 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 ATXN1LP0C7T5 689 aaKnown RBP3.01□□□□□ -1.93
LRCH3-209ENST00000452660 NHLRC4P0CG21 123 aaPredicted RBP3.01□□□□□ -1.93
LRCH3-209ENST00000452660 CNGA1P29973 690 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 KHDC1Q4VXA5 237 aaKnown RBP3.01□□□□□ -1.93
LRCH3-209ENST00000452660 MIDNQ504T8 468 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 PCID2Q5JVF3 399 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 VPS53Q5VIR6 699 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 SDE2Q6IQ49 451 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 SLC30A10Q6XR72 485 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 USP37Q86T82 979 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 CHSY1Q86X52 802 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 PRSS3P2Q8NHM4 247 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 DAZAP1Q96EP5 407 aaKnown RBP3.01□□□□□ -1.93
LRCH3-209ENST00000452660 VCPIP1Q96JH7 1222 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 MARK4Q96L34 752 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 SNX18Q96RF0 628 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 FAM118BQ9BPY3 351 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 SLC13A1Q9BZW2 595 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 HESX1Q9UBX0 185 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 ADAMTS5Q9UNA0 930 aa3.01□□□□□ -1.93
LRCH3-209ENST00000452660 SHTN1A0MZ66 631 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms