RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DLATP10515 647 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 PCSK1P29120 753 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 CUL4BQ13620 913 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 INTS6LQ5JSJ4 861 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 ZC3H14Q6PJT7 736 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 DPH6Q7L8W6 267 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 GPIHBP1Q8IV16 184 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 XXYLT1Q8NBI6 393 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 CSGALNACT1Q8TDX6 532 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 TMLHEQ9NVH6 421 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 CGNQ9P2M7 1197 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 SERTAD1Q9UHV2 236 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 NDRG2Q9UN36 371 aaKnown RBP13.83□□□□□ -0.19
CHD3-206ENST00000452447 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.19
CHD3-206ENST00000452447 PTPRJQ12913 1337 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 CHADO15335 359 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SLFN14P0C7P3 912 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SP9P0CG40 484 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.2
CHD3-206ENST00000452447 CYP4F8P98187 520 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 EHHADHQ08426 723 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 FCHO2Q0JRZ9 810 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SOWAHAQ2M3V2 549 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SPATA2LQ8IUW3 424 aaPredicted RBP13.83□□□□□ -0.2
CHD3-206ENST00000452447 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.2
CHD3-206ENST00000452447 CLDN23Q96B33 292 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 CCDC127Q96BQ5 260 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 TASP1Q9H6P5 420 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 ABCB6Q9NP58 842 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 ZMYM5Q9UJ78 669 aa13.83□□□□□ -0.2
CHD3-206ENST00000452447 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
CHD3-206ENST00000452447 FRYLO94915 3013 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 GABRDO14764 452 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 CSH1P0DML2 217 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 CSH2P0DML3 217 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 RPS9P46781 194 aaKnown RBP13.82□□□□□ -0.2
CHD3-206ENST00000452447 KRT85P78386 507 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
CHD3-206ENST00000452447 BMT2Q1RMZ1 405 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 FAM3CQ92520 227 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 RSPRY1Q96DX4 576 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 IL21Q9HBE4 155 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 EXOC1Q9NV70 894 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 OBP2AQ9NY56 170 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 R4GN57 208 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
CHD3-206ENST00000452447 NCANO14594 1321 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 OTOGLQ3ZCN5 2332 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 A0A1B0GVL5 298 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 EXOC3O60645 756 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
CHD3-206ENST00000452447 CMA1P23946 247 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 CYP2F1P24903 491 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 AVPR1AP37288 418 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 GPR15P49685 360 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 KPNA1P52294 538 aaPredicted RBP13.81□□□□□ -0.2
CHD3-206ENST00000452447 CYP24A1Q07973 514 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 PSMD6Q15008 389 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 DDR2Q16832 855 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 C1orf228Q6PIY5 440 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 OSTM1Q86WC4 334 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 CELF5Q8N6W0 485 aaKnown RBP13.81□□□□□ -0.2
CHD3-206ENST00000452447 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 THG1LQ9NWX6 298 aaKnown RBP13.81□□□□□ -0.2
CHD3-206ENST00000452447 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 FBXO4Q9UKT5 387 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 ATP6V1DQ9Y5K8 247 aa13.81□□□□□ -0.2
CHD3-206ENST00000452447 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 SHISA7A6NL88 538 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 ARNTLO00327 626 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 PFKFB1P16118 471 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 CCNE1P24864 410 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHD3-206ENST00000452447 WEE1P30291 646 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 MLLT6P55198 1093 aaPredicted RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 NLRP12P59046 1061 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 PLCB2Q00722 1185 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 CSTF1Q05048 431 aaKnown RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 PSMD2Q13200 908 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 TRPC3Q13507 836 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
CHD3-206ENST00000452447 ZNF528Q3MIS6 628 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 SDHAF4Q5VUM1 108 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 SCN4BQ8IWT1 228 aa13.8□□□□□ -0.2
CHD3-206ENST00000452447 C12orf56Q8IXR9 622 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms