RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 CEP57L1Q8IYX8 460 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 C1orf127Q8N9H9 656 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 STKLD1Q8NE28 680 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 ZSCAN18Q8TBC5 510 aaPredicted RBP9.34□□□□□ -0.91
RFX3-209ENST00000451859 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
RFX3-209ENST00000451859 OXCT2Q9BYC2 517 aaPredicted RBP9.34□□□□□ -0.91
RFX3-209ENST00000451859 IRF2BPLQ9H1B7 796 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 DNAJC25Q9H1X3 360 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 BRD9Q9H8M2 597 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 SLC39A2Q9NP94 309 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
RFX3-209ENST00000451859 HSPBP1Q9NZL4 362 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 CFAP45Q9UL16 551 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 SIT1Q9Y3P8 196 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 R3HCC1Q9Y3T6 440 aaKnown RBP9.34□□□□□ -0.91
RFX3-209ENST00000451859 SNX9Q9Y5X1 595 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 FAM186AA6NE01 2351 aa9.34□□□□□ -0.91
RFX3-209ENST00000451859 NCANO14594 1321 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 MYOFQ9NZM1 2061 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 FRYLO94915 3013 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 A0A1B0GVL5 298 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 HCRTO43612 131 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 HUS1O60921 280 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 CYP11A1P05108 521 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 DLATP10515 647 aaKnown RBP9.33□□□□□ -0.92
RFX3-209ENST00000451859 ATF6P18850 670 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 GABRR2P28476 465 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 GDI1P31150 447 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PNPLA4P41247 253 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 GPR15P49685 360 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 CYP4F8P98187 520 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 TSPY1Q01534 308 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PFKPQ01813 784 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 VEPH1Q14D04 833 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 SLC44A4Q53GD3 710 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 VITQ6UXI7 678 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 FRMD5Q7Z6J6 570 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 DNAJB7Q7Z6W7 309 aaPredicted RBP9.33□□□□□ -0.92
RFX3-209ENST00000451859 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 TMC8Q8IU68 726 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PDCL2Q8N4E4 241 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 LEMD2Q8NC56 503 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PJA1Q8NG27 643 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 OR5B17Q8NGF7 314 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 SMARCD2Q92925 531 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 ELSPBP1Q96BH3 223 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 BORCS6Q96GS4 357 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 SHDQ96IW2 340 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 ANKRD36BP1Q96IX9 119 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 ASB16Q96NS5 453 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 PI4K2AQ9BTU6 479 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 ZCWPW1Q9H0M4 648 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 ATXN3LQ9H3M9 355 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 HEBP1Q9NRV9 189 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 TMLHEQ9NVH6 421 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 DDX43Q9NXZ2 648 aaKnown RBP9.33□□□□□ -0.92
RFX3-209ENST00000451859 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 SIX4Q9UIU6 781 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 L1RE1Q9UN81 338 aa9.33□□□□□ -0.92
RFX3-209ENST00000451859 RIF1Q5UIP0 2472 aaKnown RBP9.33□□□□□ -0.92
RFX3-209ENST00000451859 PTPRZ1P23471 2315 aaPredicted RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 KANSL1LA0AUZ9 987 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 ZNF233A6NK53 670 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 HEPACAM2A8MVW5 462 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 EIF3DO15371 548 aaKnown RBP eCLIP9.32□□□□□ -0.92
RFX3-209ENST00000451859 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 TNNC2P02585 160 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 PDIA4P13667 645 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 GLULP15104 373 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 PFKFB1P16118 471 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 TNNI1P19237 187 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 PAX3P23760 479 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 EPHA5P54756 1037 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 STARD6P59095 220 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 RBP5P82980 135 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 SNRNP35Q16560 246 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 PLA2G2CQ5R387 149 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 GPR158Q5T848 1215 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 SDHAF4Q5VUM1 108 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 EPM2AIP1Q7L775 607 aaPredicted RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 HS2ST1Q7LGA3 356 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 ITIH5Q86UX2 942 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 OSTM1Q86WC4 334 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 YAF2Q8IY57 180 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 DCP1BQ8IZD4 617 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 ADGRF2Q8IZF7 708 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 SCFD1Q8WVM8 642 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 PSMG2Q969U7 264 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms