RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SPECC1L-ADORA2AF8WAN1 911 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 DENRO43583 198 aaKnown RBP9.04□□□□□ -0.96
LSM5-208ENST00000450169 PEX1O43933 1283 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 TGDSO95455 350 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 CD48P09326 243 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 FBXO45P0C2W1 286 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 MYL2P10916 166 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 PCP11498 1178 aaKnown RBP9.04□□□□□ -0.96
LSM5-208ENST00000450169 EEF2P13639 858 aaKnown RBP9.04□□□□□ -0.96
LSM5-208ENST00000450169 KRT4P19013 534 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 MAGEA4P43358 317 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 KDSRQ06136 332 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 MESDQ14696 234 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 GRAMD1BQ3KR37 738 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 USP17L2Q6R6M4 530 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 POTEHQ6S545 545 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 USP17L1Q7RTZ2 530 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 AHI1Q8N157 1196 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 SLC26A7Q8TE54 656 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 SNX29Q8TEQ0 813 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 OSBPL6Q9BZF3 934 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 TPK1Q9H3S4 243 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 NRDE2Q9H7Z3 1164 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 HEMK1Q9Y5R4 338 aaPredicted RBP9.04□□□□□ -0.96
LSM5-208ENST00000450169 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 A0A1W2PPM1 405 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 GOLGA8TH3BQL2 631 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 IPO5O00410 1097 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 TFPTP0C1Z6 253 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 OCM2P0CE71 109 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 OCMP0CE72 109 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 GOLGA8HP0CJ92 632 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PHKG2P15735 406 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ZNF16P17020 682 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 MAN1A1P33908 653 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 SOX11P35716 441 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PHKA2P46019 1235 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 BCAP31P51572 246 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ARL4CP56559 192 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ARPC4P59998 168 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 IRX4P78413 519 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 SNAPC2Q13487 334 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 APOFQ13790 326 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ACAP1Q15027 740 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 ARSHQ5FYA8 562 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 C6orf183Q5T699 404 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 DEPDC1Q5TB30 811 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 KRT79Q5XKE5 535 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PAOXQ6QHF9 649 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CLEC4GQ6UXB4 293 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 ZNF276Q8N554 614 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ALLCQ8N6M5 410 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 GRK7Q8WTQ7 553 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CD101Q93033 1021 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PRPF18Q99633 342 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 NEURL2Q9BR09 285 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PLA2G12BQ9BX93 195 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 VPS11Q9H270 941 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 SSU72Q9NP77 194 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 TBC1D23Q9NUY8 699 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 BARHL2Q9NY43 387 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 TAGLN3Q9UI15 199 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 APPL1Q9UKG1 709 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 GIT1Q9Y2X7 761 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 SPO11Q9Y5K1 396 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ANKRD36CQ5JPF3 1778 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CAPN8A6NHC0 703 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 POTEMA6NI47 508 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 RSPH10B2B2RC85 870 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CASQ2O14958 399 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 CLDN3O15551 220 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CYP26A1O43174 497 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 XPOTO43592 962 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 SPOPO43791 374 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 FGRP09769 529 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 RSPH10BP0C881 870 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PLS3P13797 630 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 RRM1P23921 792 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 LLGL1Q15334 1064 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 CALCRLQ16602 461 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 TMEM119Q4V9L6 283 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 ANO5Q75V66 913 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 DZIP1Q86YF9 867 aaKnown RBP9.03□□□□□ -0.96
LSM5-208ENST00000450169 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 PPP4R1Q8TF05 950 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 ATG4AQ8WYN0 398 aa9.03□□□□□ -0.96
LSM5-208ENST00000450169 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms