RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PPP1R15BQ5SWA1 713 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
USP39-207ENST00000450066 ARHGAP17Q68EM7 881 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 DNAJC24Q6P3W2 148 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 PDCL2Q8N4E4 241 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 ALG3Q92685 438 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 C18orf8Q96DM3 657 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 CPXM1Q96SM3 734 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.013e-12■■□□□ 13.8
USP39-207ENST00000450066 ANKZF1Q9H8Y5 726 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 WDR35Q9P2L0 1181 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 PCDHA3Q9Y5H8 950 aa15.09■□□□□ 0.01
USP39-207ENST00000450066 CYB561D2O14569 222 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 GABRB2P47870 512 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 PDCLQ13371 301 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 DCAF12L1Q5VU92 463 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 UBA3Q8TBC4 463 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 KRT35Q92764 455 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0.01
USP39-207ENST00000450066 EPC1Q9H2F5 836 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 DPEP3Q9H4B8 488 aa15.08■□□□□ 0.01
USP39-207ENST00000450066 POMCP01189 267 aa15.08■□□□□ 0
USP39-207ENST00000450066 PDGFRBP09619 1106 aa15.08■□□□□ 0
USP39-207ENST00000450066 LMO2P25791 158 aa15.08■□□□□ 0
USP39-207ENST00000450066 TUSC3Q13454 348 aa15.08■□□□□ 0
USP39-207ENST00000450066 ZNF268Q14587 947 aaPredicted RBP15.08■□□□□ 0
USP39-207ENST00000450066 CLUL1Q15846 466 aa15.08■□□□□ 0
USP39-207ENST00000450066 GOLGA7BQ2TAP0 167 aa15.08■□□□□ 0
USP39-207ENST00000450066 PKDCCQ504Y2 493 aa15.08■□□□□ 0
USP39-207ENST00000450066 CYP4A22Q5TCH4 519 aa15.08■□□□□ 0
USP39-207ENST00000450066 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.08■□□□□ 0
USP39-207ENST00000450066 LINC01599Q8WXQ3 324 aa15.08■□□□□ 0
USP39-207ENST00000450066 TNIP3Q96KP6 325 aa15.08■□□□□ 0
USP39-207ENST00000450066 SENP8Q96LD8 212 aa15.08■□□□□ 0
USP39-207ENST00000450066 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
USP39-207ENST00000450066 CRISPLD2Q9H0B8 497 aa15.08■□□□□ 0
USP39-207ENST00000450066 SYNCQ9H7C4 482 aa15.08■□□□□ 0
USP39-207ENST00000450066 IP6K2Q9UHH9 426 aa15.08■□□□□ 0
USP39-207ENST00000450066 TMEM59LQ9UK28 342 aa15.08■□□□□ 0
USP39-207ENST00000450066 CASTOR2A6NHX0 329 aa15.07■□□□□ 0
USP39-207ENST00000450066 GABRDO14764 452 aa15.07■□□□□ 0
USP39-207ENST00000450066 NBNO60934 754 aa15.07■□□□□ 0
USP39-207ENST00000450066 PFKMP08237 780 aa15.07■□□□□ 0
USP39-207ENST00000450066 RHOXF2BP0C7M4 288 aa15.07■□□□□ 0
USP39-207ENST00000450066 SETSIPP0DME0 302 aa15.07■□□□□ 0
USP39-207ENST00000450066 H2AFXP16104 143 aaPredicted RBP15.07■□□□□ 0
USP39-207ENST00000450066 IBSPP21815 317 aaPredicted RBP15.07■□□□□ 0
USP39-207ENST00000450066 PAX3P23760 479 aa15.07■□□□□ 0
USP39-207ENST00000450066 MAN1A1P33908 653 aa15.07■□□□□ 0
USP39-207ENST00000450066 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
USP39-207ENST00000450066 PSMC1P62191 440 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 RPL7AP62424 266 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 DCUN1D2Q6PH85 259 aa15.07■□□□□ 0
USP39-207ENST00000450066 ANKRD33Q7Z3H0 272 aa15.07■□□□□ 0
USP39-207ENST00000450066 XYLT1Q86Y38 959 aa15.07■□□□□ 0
USP39-207ENST00000450066 CPNE8Q86YQ8 564 aa15.07■□□□□ 0
USP39-207ENST00000450066 TMEM86AQ8N2M4 240 aa15.07■□□□□ 0
USP39-207ENST00000450066 C3orf58Q8NDZ4 430 aa15.07■□□□□ 0
USP39-207ENST00000450066 RNPC3Q96LT9 517 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 UROC1Q96N76 676 aa15.07■□□□□ 0
USP39-207ENST00000450066 RHOXF2Q9BQY4 288 aa15.07■□□□□ 0
USP39-207ENST00000450066 MIS12Q9H081 205 aa15.07■□□□□ 0
USP39-207ENST00000450066 RBM12Q9NTZ6 932 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 FAM49BQ9NUQ9 324 aa15.07■□□□□ 0
USP39-207ENST00000450066 CACNG4Q9UBN1 327 aa15.07■□□□□ 0
USP39-207ENST00000450066 HESX1Q9UBX0 185 aa15.07■□□□□ 0
USP39-207ENST00000450066 SIGLEC16A6NMB1 481 aa15.07■□□□□ 0
USP39-207ENST00000450066 PQBP1O60828 265 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 ERBB2P04626 1255 aa15.07■□□□□ 0
USP39-207ENST00000450066 TUBBP07437 444 aa15.07■□□□□ 0
USP39-207ENST00000450066 COL6A1P12109 1028 aa15.07■□□□□ 0
USP39-207ENST00000450066 IGFBP6P24592 240 aaPredicted RBP15.07■□□□□ 0
USP39-207ENST00000450066 MARCKSL1P49006 195 aa15.07■□□□□ 0
USP39-207ENST00000450066 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
USP39-207ENST00000450066 GPNMBQ14956 572 aa15.07■□□□□ 0
USP39-207ENST00000450066 PLEKHG4Q58EX7 1191 aa15.07■□□□□ 0
USP39-207ENST00000450066 WSCD1Q658N2 575 aa15.07■□□□□ 0
USP39-207ENST00000450066 GLB1LQ6UWU2 654 aa15.07■□□□□ 0
USP39-207ENST00000450066 MCEEQ96PE7 176 aa15.07■□□□□ 0
USP39-207ENST00000450066 NAP1L3Q99457 506 aaPredicted RBP15.07■□□□□ 0
USP39-207ENST00000450066 INPP5FQ9Y2H2 1132 aa15.07■□□□□ 0
USP39-207ENST00000450066 TARSL2A2RTX5 802 aaKnown RBP15.06■□□□□ 0
USP39-207ENST00000450066 HCRTO43612 131 aa15.06■□□□□ 0
USP39-207ENST00000450066 GJB6O95452 261 aa15.06■□□□□ 0
USP39-207ENST00000450066 KRT3P12035 628 aa15.06■□□□□ 0
USP39-207ENST00000450066 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
USP39-207ENST00000450066 RWDD2BP57060 319 aa15.06■□□□□ 0
USP39-207ENST00000450066 CCDC70Q6NSX1 233 aa15.06■□□□□ 0
USP39-207ENST00000450066 FBXO38Q6PIJ6 1188 aa15.06■□□□□ 0
USP39-207ENST00000450066 SLC39A5Q6ZMH5 540 aa15.06■□□□□ 0
USP39-207ENST00000450066 OSTM1Q86WC4 334 aa15.06■□□□□ 0
USP39-207ENST00000450066 TTC30AQ86WT1 665 aa15.06■□□□□ 0
USP39-207ENST00000450066 IPO4Q8TEX9 1081 aaKnown RBP15.06■□□□□ 0
USP39-207ENST00000450066 STK32AQ8WU08 396 aa15.06■□□□□ 0
USP39-207ENST00000450066 MCRS1Q96EZ8 462 aa15.06■□□□□ 0
USP39-207ENST00000450066 PAAF1Q9BRP4 392 aa15.06■□□□□ 0
USP39-207ENST00000450066 TJP2Q9UDY2 1190 aa15.06■□□□□ 0
USP39-207ENST00000450066 CAPN15O75808 1086 aa15.05■□□□□ 0
USP39-207ENST00000450066 FGGP02679 453 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms