RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 CYP24A1Q07973 514 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 PSMD2Q13200 908 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 SOWAHAQ2M3V2 549 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 STXBP5Q5T5C0 1151 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 SCARA3Q6AZY7 606 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 C12orf56Q8IXR9 622 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 GRAMD1CQ8IYS0 662 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 CCDC127Q96BQ5 260 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 SEMA4AQ9H3S1 761 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 EXOC1Q9NV70 894 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 TMLHEQ9NVH6 421 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 SPATA6Q9NWH7 488 aaPredicted RBP18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 OBP2AQ9NY56 170 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 PTPRJQ12913 1337 aa18.62■□□□□ 0.57
CLTCL1-203ENST00000449918 A0A1B0GVL5 298 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CHADO15335 359 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 EXOC3O60645 756 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CSH1P0DML2 217 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CSH2P0DML3 217 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 PFKFB1P16118 471 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 SPATA2LQ8IUW3 424 aaPredicted RBP18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CSGALNACT1Q8TDX6 532 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CLDN23Q96B33 292 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 MKNK1Q9BUB5 465 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 IL21Q9HBE4 155 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 GTF3C4Q9UKN8 822 aa18.61■□□□□ 0.57
CLTCL1-203ENST00000449918 PRR23AA6NEV1 266 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 LAMTOR5O43504 91 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 TARSP26639 723 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 RPS9P46781 194 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 MLLT6P55198 1093 aaPredicted RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 FCHO2Q0JRZ9 810 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 CFAP221Q4G0U5 840 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 C1orf228Q6PIY5 440 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 ZC3H14Q6PJT7 736 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 ASCL5Q7RTU5 278 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 LIMS2Q7Z4I7 341 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 OSTM1Q86WC4 334 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 GPIHBP1Q8IV16 184 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 FAM3CQ92520 227 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 MSANTD3Q96H12 275 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 FUBP3Q96I24 572 aaKnown RBP eCLIP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 MMS19Q96T76 1030 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 PKMYT1Q99640 499 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 SCAND2PQ9GZW5 306 aaPredicted RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 UXTQ9UBK9 157 aaPredicted RBP18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 CDH9Q9ULB4 789 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 ZDHHC9Q9Y397 364 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 PIAS3Q9Y6X2 628 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 TSC2P49815 1807 aa18.6■□□□□ 0.57
CLTCL1-203ENST00000449918 SOBPA7XYQ1 873 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 KLRC4O43908 158 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 FAM163BP0C2L3 166 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 SP9P0CG40 484 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 HMGA1P17096 107 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 CYP2F1P24903 491 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 DDX6P26196 483 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 SYKP43405 635 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 NLRP12P59046 1061 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 CYP4F8P98187 520 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 STK4Q13043 487 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 TRPC3Q13507 836 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 KMT5BQ4FZB7 885 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 ARHGAP29Q52LW3 1261 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 FAM171BQ6P995 826 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 C4orf50Q6ZRC1 276 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 RSPRY1Q96DX4 576 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 SLC46A2Q9BY10 475 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 THG1LQ9NWX6 298 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 FBXO4Q9UKT5 387 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 MAGED2Q9UNF1 606 aaPredicted RBP18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 HPSEQ9Y251 543 aa18.59■□□□□ 0.57
CLTCL1-203ENST00000449918 MYBPHLA2RUH7 354 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 ARNTLO00327 626 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 PHACTR2O75167 634 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 CST3P01034 146 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 F11P03951 625 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 WARSP23381 471 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 AVPR1AP37288 418 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 GPR15P49685 360 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 KPNA1P52294 538 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 AP3M2P53677 418 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 PLCB2Q00722 1185 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 DDR2Q16832 855 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 CELF5Q8N6W0 485 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 BPIFB1Q8TDL5 484 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 MRPS31Q92665 395 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 CCDC47Q96A33 483 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 SYT15Q9BQS2 421 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 SNX25Q9H3E2 840 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 C8orf33Q9H7E9 229 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 MAGEC2Q9UBF1 373 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 NDRG2Q9UN36 371 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 TCHHQ07283 1943 aa18.58■□□□□ 0.56
CLTCL1-203ENST00000449918 NCANO14594 1321 aa18.57■□□□□ 0.56
CLTCL1-203ENST00000449918 SHISA7A6NL88 538 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms