RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TMC6Q7Z403 805 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 FAM114A1Q8IWE2 563 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 OR10T2Q8NGX3 314 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 MRPL17Q9NRX2 175 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 EIF3CLB5ME19 914 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 LINC01565O15544 149 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 SPATA31D3P0C874 917 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 PNPLA4P41247 253 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 NRIP1P48552 1158 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 COPB1P53618 953 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 CORO7P57737 925 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 MYO1EQ12965 1108 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 ORC1Q13415 861 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 SPATA31D4Q6ZUB0 917 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 ARHGEF19Q8IW93 802 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 EIF3CQ99613 913 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 HMGXB4Q9UGU5 601 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 LIMA1Q9UHB6 759 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 CDY1Q9Y6F8 540 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 TEX33O43247 280 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 TBC1D4O60343 1298 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ATP2C2O75185 946 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ARPP19P56211 112 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 YWHAHQ04917 246 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ELAVL2Q12926 359 aaKnown RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ZNF667Q5HYK9 610 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 DPY19L2P1Q6NXN4 242 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 PALB2Q86YC2 1186 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 HNRNPLLQ8WVV9 542 aaKnown RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 KLHL5Q96PQ7 755 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 VRTNQ9H8Y1 702 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 IRAK3Q9Y616 596 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 MAP2K7O14733 419 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 SYN3O14994 580 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 KIF1CO43896 1103 aaKnown RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 STX10O60499 249 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ERLIN1O75477 346 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 STAU1O95793 577 aaKnown RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 CYP11A1P05108 521 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 PDGFRBP09619 1106 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 CCDC172P0C7W6 258 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ODC1P11926 461 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 FOSL2P15408 326 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ATICP31939 592 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 OR1D2P34982 312 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 HYAL1Q12794 435 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 PHLDB3Q6NSJ2 640 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 TRIM65Q6PJ69 517 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 MMS22LQ6ZRQ5 1243 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 RSRC2Q7L4I2 434 aaKnown RBP10.51□□□□□ -0.73
CCDC171-203ENST00000449575 RRAGAQ7L523 313 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 HDXQ7Z353 690 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ADGRF2Q8IZF7 708 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 LMAN2LQ9H0V9 348 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 ACBD3Q9H3P7 528 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 DPEP3Q9H4B8 488 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
CCDC171-203ENST00000449575 LRRC10BA6NIK2 292 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CBFA2T2O43439 604 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 HUS1O60921 280 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 OAZ2O95190 189 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CD58P19256 250 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 POU3F3P20264 500 aaPredicted RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PON1P27169 355 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 USP8P40818 1118 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TNNC1P63316 161 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PTPROQ16827 1216 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 LONRF2Q1L5Z9 754 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TWNKQ96RR1 684 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 INTS2Q9H0H0 1204 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 SIX2Q9NPC8 291 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 NGRNQ9NPE2 291 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 TMLHEQ9NVH6 421 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 DDX43Q9NXZ2 648 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 WDR27A2RRH5 827 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 GABRDO14764 452 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 PMM2O15305 246 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 CLASP2O75122 1294 aaKnown RBP10.5□□□□□ -0.73
CCDC171-203ENST00000449575 VNN2O95498 520 aa10.5□□□□□ -0.73
CCDC171-203ENST00000449575 GLP2RO95838 553 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms