RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 OSTM1Q86WC4 334 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SPATA18Q8TC71 538 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SNX25Q9H3E2 840 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 COG5Q9UP83 839 aa13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PRG3Q9Y2Y8 225 aaPredicted RBP13.52□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TCF20Q9UGU0 1960 aaKnown RBP13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NCANO14594 1321 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ARHGEF37A1IGU5 675 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 RCCD1A6NED2 376 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 A8MXQ7 604 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 I3L4J1 428 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 M0QZQ0 153 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PJA2O43164 708 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MED7O43513 233 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DGKIO75912 1065 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NOMO3P69849 1222 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TIGD5Q53EQ6 642 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PPP2R2DQ66LE6 453 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ZNF606Q8WXB4 792 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TFAP2BQ92481 460 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TOP1MTQ969P6 601 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ZSWIM1Q9BR11 485 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PDCL3Q9H2J4 239 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 LZTFL1Q9NQ48 299 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MARCH5Q9NX47 278 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TAS2R14Q9NYV8 317 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DSEQ9UL01 958 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PCDHGC3Q9UN70 934 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MYH10P35580 1976 aa13.51□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TMCO5BA8MYB1 307 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 GABRDO14764 452 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 HCRTO43612 131 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 KRT86O43790 486 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TLL1O43897 1013 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 LSM8O95777 96 aaKnown RBP13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 FGBP02675 491 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CYP11A1P05108 521 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CFHP08603 1231 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 VDRP11473 427 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 GZMAP12544 262 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SLC11A1P49279 550 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CENPCQ03188 943 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 KIF5AQ12840 1032 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 STILQ15468 1287 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 OTOP2Q7RTS6 562 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ZNF689Q96CS4 500 aaPredicted RBP13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 C16orf45Q96MC5 204 aaPredicted RBP13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 LACRTQ9GZZ8 138 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DPEP3Q9H4B8 488 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TRIM10Q9UDY6 481 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 INTUQ9ULD6 942 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PCDHB8Q9UN66 801 aa13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.5□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PLXNA4Q9HCM2 1894 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MYO16Q9Y6X6 1858 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 M0QYV0 167 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 O00370 1275 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NRP1O14786 923 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 RTN2O75298 545 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 H2AFZP0C0S5 128 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 UNGP13051 313 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TYMPP19971 482 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CDH5P33151 784 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 LHX1P48742 406 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PSMC1P62191 440 aaKnown RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 GOLGA7BQ2TAP0 167 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 NAA35Q5VZE5 725 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 PPP1R2P3Q6NXS1 205 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 FAM117BQ6P1L5 589 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 H2AFVQ71UI9 128 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 TMCO2Q7Z6W1 182 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 METTL23Q86XA0 190 aa13.49□□□□□ -0.25
HLA-DRB9-201ENST00000449413 DNAAF5Q86Y56 855 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms