RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
RPS28-202ENST00000449223 TKTP29401 623 aaKnown RBP20.46■□□□□ 0.87
RPS28-202ENST00000449223 PPM1AP35813 382 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PBX3P40426 434 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 MAGEA1P43355 309 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PKDCCQ504Y2 493 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 KIAA0319Q5VV43 1072 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 REXO1L1PQ8IX06 675 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 THEM5Q8N1Q8 247 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 FIBCD1Q8N539 461 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PKMYT1Q99640 499 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 SYT15Q9BQS2 421 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 OXCT2Q9BYC2 517 aaPredicted RBP20.46■□□□□ 0.87
RPS28-202ENST00000449223 AAASQ9NRG9 546 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PTPRDP23468 1912 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 ESPNB1AK53 854 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 PPP1R26Q5T8A7 1209 aaPredicted RBP20.45■□□□□ 0.86
RPS28-202ENST00000449223 FAM171A1Q5VUB5 890 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 FAM171BQ6P995 826 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 CYFIP2Q96F07 1278 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 PPP1R13BQ96KQ4 1090 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 HNRNPABQ99729 332 aaKnown RBP20.45■□□□□ 0.86
RPS28-202ENST00000449223 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 CHST7Q9NS84 486 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 SEPT11Q9NVA2 429 aaKnown RBP20.45■□□□□ 0.86
RPS28-202ENST00000449223 TAS2R14Q9NYV8 317 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 SPG21Q9NZD8 308 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 TSPAN16Q9UKR8 245 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 LAMA2P24043 3122 aaKnown RBP20.45■□□□□ 0.86
RPS28-202ENST00000449223 NLRC5Q86WI3 1866 aa20.45■□□□□ 0.86
RPS28-202ENST00000449223 TLL1O43897 1013 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 INTS6LQ5JSJ4 861 aaKnown RBP20.44■□□□□ 0.86
RPS28-202ENST00000449223 VARS2Q5ST30 1063 aaKnown RBP20.44■□□□□ 0.86
RPS28-202ENST00000449223 C9orf50Q5SZB4 431 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 SPOUT1Q5T280 376 aaKnown RBP20.44■□□□□ 0.86
RPS28-202ENST00000449223 ACAD10Q6JQN1 1059 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 GPR65Q8IYL9 337 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 TMEM35BQ8NCS4 154 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 MYCBPAPQ8TBZ2 947 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 VCPIP1Q96JH7 1222 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 GDF15Q99988 308 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 TTPALQ9BTX7 342 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 VN1R3Q9BXE9 311 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 CRTAC1Q9NQ79 661 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
RPS28-202ENST00000449223 ANKRD62A6NC57 917 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 RCCD1A6NED2 376 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 USP27XA6NNY8 438 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 BTNL10A8MVZ5 291 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 TBC1D4O60343 1298 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 MICAL2O94851 1124 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 H2AFZP0C0S5 128 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 PLCB3Q01970 1234 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 MAPRE1Q15691 268 aaKnown RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 H2AFVQ71UI9 128 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 PHF13Q86YI8 300 aaPredicted RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 OR10T2Q8NGX3 314 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 TMEM169Q96HH4 297 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 TSGA10Q9BZW7 698 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 ZNF500O60304 480 aaPredicted RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 ATP2C2O75185 946 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 FTLP02792 175 aaPredicted RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 SOD2P04179 222 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 TMEM253P0C7T8 217 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 SETSIPP0DME0 302 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 ACAT1P24752 427 aaKnown RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 ARHGAP25P42331 645 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 GPD2P43304 727 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 PSMC1P62191 440 aaKnown RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 USP41Q3LFD5 358 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 ZNF280DQ6N043 979 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 ANKS3Q6ZW76 656 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 KIAA1328Q86T90 577 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 DDX53Q86TM3 631 aaKnown RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 FUKQ8N0W3 1084 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 WDTC1Q8N5D0 677 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 ANKRD52Q8NB46 1076 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 RNPC3Q96LT9 517 aaKnown RBP20.43■□□□□ 0.86
RPS28-202ENST00000449223 PACSIN1Q9BY11 444 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 LACRTQ9GZZ8 138 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 FAM49BQ9NUQ9 324 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 PCDHB12Q9Y5F1 795 aa20.43■□□□□ 0.86
RPS28-202ENST00000449223 GBF1Q92538 1859 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 OR6C75A6NL08 312 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 KRT86O43790 486 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 MMP8P22894 467 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 NSFP46459 744 aaKnown RBP20.42■□□□□ 0.86
RPS28-202ENST00000449223 GALCP54803 685 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 TSPY1Q01534 308 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 C1QBPQ07021 282 aaKnown RBP20.42■□□□□ 0.86
RPS28-202ENST00000449223 KIF5AQ12840 1032 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 TCEAL1Q15170 157 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 SHHQ15465 462 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 RTP2Q5QGT7 225 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 NAA35Q5VZE5 725 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 DENND1BQ6P3S1 775 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 PAQR9Q6ZVX9 377 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 MON1BQ7L1V2 547 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms