RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PARD3BQ8TEW8 1205 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 KRT35Q92764 455 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 PPP1R36Q96LQ0 422 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 SHCBP1LQ9BZQ2 653 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 GANQ9H2C0 597 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 GDF3Q9NR23 364 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 DONSONQ9NYP3 566 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 WHRNQ9P202 907 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 TYW5A2RUC4 315 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 GOLGA8CPA6NN73 597 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 AGPSO00116 658 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 KIF1CO43896 1103 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 BNIP3LO60238 219 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 CSDE1O75534 798 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 SNRPAP09012 282 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 RPS12P25398 132 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 PRKCIP41743 596 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 RPL21P46778 160 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 ATXN3P54252 364 aaPredicted RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 DLG4P78352 724 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 OTUD4Q01804 1114 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 CAPRIN2Q6IMN6 1127 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 BTNL9Q6UXG8 535 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 APTXQ7Z2E3 356 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 PRUNE1Q86TP1 453 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 MCOLN2Q8IZK6 566 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 NDUFAF2Q8N183 169 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 RIBC1Q8N443 379 aaPredicted RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 CCDC33Q8N5R6 958 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 SLC26A7Q8TE54 656 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 SDCCAG3Q96C92 435 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 TMEM121Q9BTD3 319 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 FAM129AQ9BZQ8 928 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 BAG5Q9UL15 447 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 TRIM49D1C9J1S8 452 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 UPP2O95045 317 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 CSPG5O95196 566 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 PGK2P07205 417 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 CYP3A4P08684 503 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 PAPOLAP51003 745 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 KIF19Q2TAC6 998 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 GOLGA7BQ2TAP0 167 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 FASTKD1Q53R41 847 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 AMIGO3Q86WK7 504 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 AGGF1Q8N302 714 aaeCLIP7.48□□□□□ -1.21
BEST1-202ENST00000449131 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
BEST1-202ENST00000449131 CGRRF1Q99675 332 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 BCAS3Q9H6U6 928 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 CISHQ9NSE2 258 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 CTNNAL1Q9UBT7 734 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 SLC4A7Q9Y6M7 1214 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 MRC1P22897 1456 aa7.48□□□□□ -1.21
BEST1-202ENST00000449131 STRCP1A6NGW2 1772 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ANKRD63C9JTQ0 380 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 DFFAO00273 331 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PSMD10O75832 226 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SLC25A27O95847 323 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 HNRNPH3P31942 346 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 GEMIN4P57678 1058 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 IL1RL1Q01638 556 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SATB1Q01826 763 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 CACNB2Q08289 660 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 CCNG2Q16589 344 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 QPCTQ16769 361 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SHROOM1Q2M3G4 852 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 DCAF6Q58WW2 860 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 TFDP3Q5H9I0 405 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 GLRA4Q5JXX5 417 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 RABGAP1LQ5R372 815 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 MROH9Q5TGP6 573 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 FAM83AQ86UY5 434 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ABRAQ8N0Z2 381 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 AKT1S1Q96B36 256 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 NDE1Q9NXR1 346 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 HAO1Q9UJM8 370 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 WNT10BO00744 389 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 GJB6O95452 261 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ANP32DO95626 131 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 MAPTP10636 758 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 TCF3P15923 654 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 MARCKSL1P49006 195 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 AP2B1P63010 937 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 BOLA3Q53S33 107 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 FAM182AQ5T1J6 154 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 BTBD8Q5XKL5 378 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ISLR2Q6UXK2 745 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 DEFB132Q7Z7B7 95 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 EXD1Q8NHP7 514 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ACTL9Q8TC94 416 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 PDCD6IPQ8WUM4 868 aaKnown RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 ZNF606Q8WXB4 792 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 ZBTB45Q96K62 511 aaPredicted RBP7.47□□□□□ -1.21
BEST1-202ENST00000449131 EPAS1Q99814 870 aa7.47□□□□□ -1.21
BEST1-202ENST00000449131 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms