RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 GALNTL6Q49A17 601 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 CELF3Q5SZQ8 465 aaKnown RBP17.83■□□□□ 0.45
TOM1-210ENST00000449058 ATF7IP2Q5U623 682 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 SPATA21Q7Z572 469 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 ARFGAP1Q8N6T3 406 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 TMEM121Q9BTD3 319 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 UBN1Q9NPG3 1134 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 CYTH4Q9UIA0 394 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 POLIQ9UNA4 740 aa17.83■□□□□ 0.45
TOM1-210ENST00000449058 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.83■□□□□ 0.45
TOM1-210ENST00000449058 MGRN1O60291 552 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 POLR2BP30876 1174 aaKnown RBP17.83■□□□□ 0.44
TOM1-210ENST00000449058 LACTBP83111 547 aaPredicted RBP17.83■□□□□ 0.44
TOM1-210ENST00000449058 TAZQ16635 292 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 THNSL1Q8IYQ7 743 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 FNIP1Q8TF40 1166 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 PRCCQ92733 491 aaPredicted RBP17.83■□□□□ 0.44
TOM1-210ENST00000449058 HAUS1Q96CS2 278 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 ANKRD36BP1Q96IX9 119 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 FGD4Q96M96 766 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 BCO2Q9BYV7 579 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 R3HDMLQ9H3Y0 253 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 ARL2BPQ9Y2Y0 163 aa17.83■□□□□ 0.44
TOM1-210ENST00000449058 FAM47DPA6NHR8 397 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 LRCH4O75427 683 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 UBOX5O94941 541 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 PSMA2P25787 234 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 GSCP56915 257 aaPredicted RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 SNCBQ16143 134 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 EEF1DP3Q658K8 133 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 CGB2Q6NT52 195 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 CEP120Q8N960 986 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 JOSD2Q8TAC2 188 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 PLCD4Q9BRC7 762 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 FRMD8P1Q9BZ68 369 aaPredicted RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 GOLGA8SH3BPF8 625 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 SGK1O00141 431 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 B4GALT5O43286 388 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 MED7O43513 233 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 CNMDO75829 334 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 ITGBL1O95965 494 aaPredicted RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 KRT3P12035 628 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 TAC1P20366 129 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 SLC18A1P54219 525 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 WDR4P57081 412 aaKnown RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 ELF3P78545 371 aaPredicted RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 RASA2Q15283 850 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 FAM133BQ5BKY9 247 aaKnown RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 CD248Q9HCU0 757 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 NXF1Q9UBU9 619 aaKnown RBP17.82■□□□□ 0.44
TOM1-210ENST00000449058 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 SIX4Q9UIU6 781 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 AGAP1Q9UPQ3 857 aa17.82■□□□□ 0.44
TOM1-210ENST00000449058 PRPF4O43172 522 aaKnown RBP eCLIP17.81■□□□□ 0.44
TOM1-210ENST00000449058 KRT7P08729 469 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 IL1R2P27930 398 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 FOXN2P32314 431 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 RAD23BP54727 409 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 TFDP1Q14186 410 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 BBS12Q6ZW61 710 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 CENPUQ71F23 418 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 FAM228AQ86W67 206 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 KIAA0319LQ8IZA0 1049 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 GBP7Q8N8V2 638 aaPredicted RBP17.81■□□□□ 0.44
TOM1-210ENST00000449058 CCDC63Q8NA47 563 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 DENND1AQ8TEH3 1009 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 FAXDC2Q96IV6 333 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 PPCSQ9HAB8 311 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 CFAP73A6NFT4 308 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 NOP56O00567 594 aaKnown RBP17.81■□□□□ 0.44
TOM1-210ENST00000449058 IL18RAPO95256 599 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 CD19P15391 556 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 RAP1GAPP47736 663 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 OSTNP61366 133 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 IL9RQ01113 521 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 PLCB3Q01970 1234 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 ADCY1Q08828 1119 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 MTFR1Q15390 333 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
TOM1-210ENST00000449058 MAGEC3Q8TD91 643 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 PHACTR1Q9C0D0 580 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 CDT1Q9H211 546 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 TNFSF13BQ9Y275 285 aa17.81■□□□□ 0.44
TOM1-210ENST00000449058 INO80B-WBP1J3KQ70 363 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 ASMTLO95671 621 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 GJB1P08034 283 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 PSMC1P62191 440 aaKnown RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 OTUD4Q01804 1114 aaKnown RBP17.8■□□□□ 0.44
TOM1-210ENST00000449058 MBTD1Q05BQ5 628 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 ZBED8Q8IZ13 594 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 TTC13Q8NBP0 860 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 ACTL9Q8TC94 416 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 TRAPPC12Q8WVT3 735 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 GRAMD1AQ96CP6 724 aa17.8■□□□□ 0.44
TOM1-210ENST00000449058 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms