RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GRM2Q14416 872 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC39A12Q504Y0 691 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 EFHC2Q5JST6 749 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RABGAP1LQ5R372 815 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MYLK4Q86YV6 388 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 KXD1Q9BQD3 176 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 DDX43Q9NXZ2 648 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TAB2Q9NYJ8 693 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LRRC72A6NJI9 287 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SRGAP2O75044 1071 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAFO75444 373 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 DUSP3P51452 185 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LMNB2Q03252 620 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LRRC63Q05C16 580 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 COASYQ13057 564 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CMTR2Q8IYT2 770 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP6V0D2Q8N8Y2 350 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC63Q8NA47 563 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 KLHL5Q96PQ7 755 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ABI3Q9P2A4 366 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 F2P00734 622 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LCP1P13796 627 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 GUCY1A2P33402 732 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ACADSBP45954 432 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBE3AQ05086 875 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF235Q14590 738 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RASGRP2Q7LDG7 609 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SZRD1Q7Z422 152 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF438Q7Z4V0 828 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RABEPKQ7Z6M1 372 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMEM86AQ8N2M4 240 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCHCR1Q8TD31 782 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 EPSTI1Q96J88 318 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 NAA15Q9BXJ9 866 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ELOVL4Q9GZR5 314 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MRPL47Q9HD33 250 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RAB20Q9NX57 234 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 HSPBP1Q9NZL4 362 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TBX20Q9UMR3 447 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 NFE2L3Q9Y4A8 694 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CLIC4Q9Y696 253 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RHPN2P1A8MT19 583 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TACC1O75410 805 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SETSIPP0DME0 302 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FBXL19Q6PCT2 694 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ENOSF1Q7L5Y1 443 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CATSPER3Q86XQ3 398 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 KSR1Q8IVT5 923 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBL4BQ8N7F7 174 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SPPL2BQ8TCT7 592 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 E2F7Q96AV8 911 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SENP8Q96LD8 212 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 GJB4Q9NTQ9 266 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PRRC2BQ5JSZ5 2229 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBE4BO95155 1302 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC12A8A0AV02 714 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 GOLGA6L10A6NI86 522 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM47E-STBD1D6RA91 191 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FGFR1P11362 822 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ARRB1P49407 418 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ARHGAP1Q07960 439 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ACOT1Q86TX2 421 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 LMAN1LQ9HAT1 526 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TBC1D14Q9P2M4 693 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 FTSJ1Q9UET6 329 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCNE1P24864 410 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CHKAP35790 457 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 RARRES1P49788 294 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SARNPP82979 210 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 IL1RL1Q01638 556 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 NAALADL2Q58DX5 795 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 EEF2KMTQ96G04 330 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 LRRC4CQ9HCJ2 640 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLAMF7Q9NQ25 335 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDLIM7Q9NR12 457 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 GCNT4Q9P109 453 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 NHSQ6T4R5 1651 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 RALBP11234 206 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ETFBP38117 255 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNRNP35Q16560 246 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 AMHR2Q16671 573 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CDO1Q16878 200 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PABPC5Q96DU9 382 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PPP1R16AQ96I34 528 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 REEP2Q9BRK0 252 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PCDHA7Q9UN72 937 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC66A2RUB6 948 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMEM221A6NGB7 291 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 M0R296 226 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PEX12O00623 359 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP9AO75110 1047 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF865P0CJ78 1059 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ITGB5P18084 799 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 RASGRP3Q8IV61 690 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 ADSSL1Q8N142 457 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 KLHL23Q8NBE8 558 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 OR14C36Q8NHC7 312 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 TEKT4Q8WW24 435 aa5.92□□□□□ -1.46
CDC42BPA-209ENST00000448940 PRCCQ92733 491 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms