RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PARP2Q9UGN5 583 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 DMGDHQ9UI17 866 aaKnown RBP11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM170AA1A519 330 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 GPR182O15218 404 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 SART1O43290 800 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 AOC2O75106 756 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 ASGR1P07306 291 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 SNX16P57768 344 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 NNTQ13423 1086 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 DHX34Q14147 1143 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 GDF6Q6KF10 455 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 DCUN1D2Q6PH85 259 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 RNF180Q86T96 592 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 C3orf20Q8ND61 904 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 PPP1R13LQ8WUF5 828 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 TFAP2BQ92481 460 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 KRT35Q92764 455 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 BTBD6Q96KE9 485 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 HEXIM2Q96MH2 286 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 APOL6Q9BWW8 343 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 ELOVL4Q9GZR5 314 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 RAB17Q9H0T7 212 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 CHORDC1Q9UHD1 332 aaPredicted RBP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 IPPQ9Y573 584 aa11.19□□□□□ -0.62
VIPAS39-203ENST00000448935 SMIM28A0A1B0GU29 152 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM187AA6NFU0 413 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 TMEM191CA6NGB0 347 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 RAD51CO43502 376 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 FAM163BP0C2L3 166 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 CHRNA3P32297 505 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 MAP2K2P36507 400 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 TNNT3P45378 269 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 GUCY2FP51841 1108 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 NDST1P52848 882 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 SLC7A5Q01650 507 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 GUCY2DQ02846 1103 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 CUL1Q13616 776 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 ZNF268Q14587 947 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 CASP8Q14790 479 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 KCNA10Q16322 511 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 SV2CQ496J9 727 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 HDAC7Q8WUI4 952 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 EPB41L5Q9HCM4 733 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 SLC38A7Q9NVC3 462 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 RNF186Q9NXI6 227 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 RASAL2Q9UJF2 1139 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 HES2Q9Y543 173 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
VIPAS39-203ENST00000448935 M0QYV0 167 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 PIRO00625 290 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 PHF2O75151 1096 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 CAND2O75155 1236 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 SETSIPP0DME0 302 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 AKAP5P24588 427 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 CCND3P30281 292 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 TAF6P49848 677 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 PRMT2P55345 433 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 LRRC38Q5VT99 294 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 WDTC1Q8N5D0 677 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 RAET1EQ8TD07 263 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 FNIP1Q8TF40 1166 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 AENQ8WTP8 325 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 HOMER3Q9NSC5 361 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 TUBGCP4Q9UGJ1 667 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 UTP11Q9Y3A2 253 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 TCRBV5S1A1TA0A578 114 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 SIGLEC16A6NMB1 481 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 KPNA7A9QM74 516 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 O00370 1275 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 FSCN2O14926 492 aa11.17□□□□□ -0.62
VIPAS39-203ENST00000448935 MICAL2O94851 1124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms