RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 ZNF200P98182 395 aaPredicted RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 MGAT3Q09327 533 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 FOXC1Q12948 553 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 ARHGEF6Q15052 776 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 CNGA2Q16280 664 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 MAP9Q49MG5 647 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 FAM26DQ5JW98 314 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 BEND6Q5SZJ8 279 aaPredicted RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 DCAF12L1Q5VU92 463 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 NAA35Q5VZE5 725 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 UNC93AQ86WB7 457 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 DNAAF5Q86Y56 855 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SLC4A11Q8NBS3 891 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 BEST2Q8NFU1 509 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SNIP1Q8TAD8 396 aaKnown RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 PNKPQ96T60 521 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 ZSWIM1Q9BR11 485 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 PLVAPQ9BX97 442 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 EIF2AQ9BY44 585 aaKnown RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 SENP6Q9GZR1 1112 aaPredicted RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 SDCBP2Q9H190 292 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SLITRK6Q9H5Y7 841 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 XPNPEP3Q9NQH7 507 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.235e-6■■■■■ 31.1
RFC4-209ENST00000448497 PARVAQ9NVD7 372 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.34□□□□□ -1.23
RFC4-209ENST00000448497 RNF186Q9NXI6 227 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 GDAP2Q9NXN4 497 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 ADAM22Q9P0K1 906 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 WDR35Q9P2L0 1181 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 STRIP2Q9ULQ0 834 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 L1RE1Q9UN81 338 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 PACSIN2Q9UNF0 486 aaPredicted RBP7.34□□□□□ -1.23
RFC4-209ENST00000448497 AGAP1Q9UPQ3 857 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 CEP83Q9Y592 693 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 PCDHA3Q9Y5H8 950 aa7.34□□□□□ -1.23
RFC4-209ENST00000448497 SMIM28A0A1B0GU29 152 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 MYO1FO00160 1098 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 PIRO00625 290 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 PSTPIP1O43586 416 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 CEP104O60308 925 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ZNF623O75123 536 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 PROSCO94903 275 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ASGR1P07306 291 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 KRT19P08727 400 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 WEE2P0C1S8 567 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 VDRP11473 427 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ATF7P17544 494 aaPredicted RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 COMTP21964 271 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 FGFR4P22455 802 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 PAX3P23760 479 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 RRM1P23921 792 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 LRPAP1P30533 357 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 GABRB2P47870 512 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 RAB27AP51159 221 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 VSNL1P62760 191 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 CAP1Q01518 475 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 C2orf54Q08AI8 447 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 VAC14Q08AM6 782 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 TMEM62Q0P6H9 643 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 PTK7Q13308 1070 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 MAMLD1Q13495 774 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 LAPTM4AQ15012 233 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 LRRC38Q5VT99 294 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 C9orf57Q5W0N0 161 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 LCLAT1Q6UWP7 414 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 CXCL17Q6UXB2 119 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 DPH6Q7L8W6 267 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 MRPL10Q7Z7H8 261 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 FAM228AQ86W67 206 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 HACE1Q8IYU2 909 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 WDTC1Q8N5D0 677 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 NIPA2Q8N8Q9 360 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 SMG8Q8ND04 991 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 C3orf20Q8ND61 904 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 FNIP1Q8TF40 1166 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 CPA5Q8WXQ8 436 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 TFAP2BQ92481 460 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 SEC14L1Q92503 715 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ALG3Q92685 438 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 TMEM176AQ96HP8 235 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 MS4A14Q96JA4 679 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 RNPC3Q96LT9 517 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 ZNF560Q96MR9 790 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 ZMAT2Q96NC0 199 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 TRIM6Q9C030 488 aaPredicted RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 MIS12Q9H081 205 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 GOLPH3Q9H4A6 298 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 VIPAS39Q9H9C1 493 aa7.33□□□□□ -1.24
RFC4-209ENST00000448497 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
RFC4-209ENST00000448497 ZNF446Q9NWS9 450 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms