RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 NWD2Q9ULI1 1742 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 AXIN1O15169 862 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 RTN3O95197 1032 aaPredicted RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 POLR2EP19388 210 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 ABCE1P61221 599 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 MCL1Q07820 350 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 DDR1Q08345 913 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 DNAJC3Q13217 504 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 DGUOKQ16854 277 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 PEX5LQ8IYB4 626 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 NUP93Q8N1F7 819 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 PCYOX1LQ8NBM8 494 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 ZNF384Q8TF68 577 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 HPS1Q92902 700 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 MAGED4Q96JG8 741 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 MLPHQ9BV36 600 aaPredicted RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 KCNG1Q9UIX4 513 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 MST1RQ04912 1400 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 LAD1O00515 517 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 CLASP2O75122 1294 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 SRP72O76094 671 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 DLATP10515 647 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 TAB1Q15750 504 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 NPY5RQ15761 445 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 AASDHQ4L235 1098 aaPredicted RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 DNAJC24Q6P3W2 148 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 FBXO33Q7Z6M2 555 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 YTHDF3Q7Z739 585 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 AGAP11Q8TF27 550 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 CEP72Q9P209 647 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 PLAGL2Q9UPG8 496 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 SNX2O60749 519 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 GGPS1O95749 300 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 SPANXN2Q5MJ10 180 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 IZUMO3Q5VZ72 239 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 IFNEQ86WN2 208 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 UNC45BQ8IWX7 931 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 OTULINQ96BN8 352 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 TMEM79Q9BSE2 394 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 HEMGNQ9BXL5 484 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 IKZF4Q9H2S9 585 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 C12orf4Q9NQ89 552 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 ZSCAN32Q9NX65 697 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 HEY2Q9UBP5 337 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 PIPSLA2A3N6 862 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 CCDC182A6NF36 153 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 ABLIM1O14639 778 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 KLRC4O43908 158 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 YWHABP31946 246 aaKnown RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 BNC1Q01954 994 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 TRIP4Q15650 581 aaPredicted RBP9.6□□□□□ -0.87
SMC6-207ENST00000448223 PHTF1Q9UMS5 762 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 ITM2BQ9Y287 266 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 MYRFQ9Y2G1 1151 aa9.6□□□□□ -0.87
SMC6-207ENST00000448223 A8MXQ7 604 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 EVPLLA8MZ36 301 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TSPAN4O14817 238 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TBC1D12O60347 775 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 SCNN1BP51168 640 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 GALK1P51570 392 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 LRRC63Q05C16 580 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■□□□□ 8.8
SMC6-207ENST00000448223 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 LRRC6Q86X45 466 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 CREG2Q8IUH2 290 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 GUF1Q8N442 669 aaKnown RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 CDHR1Q96JP9 859 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 KLHL32Q96NJ5 620 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 C6orf62Q9GZU0 229 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 ZNF212Q9UDV6 495 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 SALL4Q9UJQ4 1053 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 A0A1W2PRG6 482 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 GPSM2P81274 684 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 CDC37Q16543 378 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 PERM1Q5SV97 790 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 LAYNQ6UX15 382 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 IKBIPQ70UQ0 350 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 CYFIP1Q7L576 1253 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 PRUNE1Q86TP1 453 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 VPS50Q96JG6 964 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ISCUQ9H1K1 167 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 PPCSQ9HAB8 311 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 HESX1Q9UBX0 185 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 TTLL1O95922 423 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 ABCB1P08183 1280 aaPredicted RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 TYK2P29597 1187 aa9.59□□□□□ -0.87
SMC6-207ENST00000448223 NMT1P30419 496 aaKnown RBP9.59□□□□□ -0.87
SMC6-207ENST00000448223 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms