RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 HEXIM2Q96MH2 286 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 SAMD11Q96NU1 681 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 PCDHB18PQ96TA0 734 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 TTPALQ9BTX7 342 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 ISCUQ9H1K1 167 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 INTUQ9ULD6 942 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 TIMM13Q9Y5L4 95 aaPredicted RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 ADGRG1Q9Y653 693 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 LCHNA4D1U4 455 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 IPO7O95373 1038 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 SETSIPP0DME0 302 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 CD19P15391 556 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 BRD2P25440 801 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 DSG1Q02413 1049 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 CENPCQ03188 943 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 GFPT1Q06210 699 aaPredicted RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 SPA17Q15506 151 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 CLEC16AQ2KHT3 1053 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 ALKBH5Q6P6C2 394 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 KIAA1524Q8TCG1 905 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 PRO3102Q9H379 93 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 MTRRQ9UBK8 725 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
SCAP-208ENST00000448217 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
SCAP-208ENST00000448217 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 PJA2O43164 708 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 HCRTO43612 131 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 RTN2O75298 545 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 FGF18O76093 207 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 CCDC175P0C221 793 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 RPL34P49207 117 aaKnown RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 NOMO3P69849 1222 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 TSPY1Q01534 308 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 KRT17Q04695 432 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 UBE3AQ05086 875 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 RTP2Q5QGT7 225 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 PPP1R26Q5T8A7 1209 aaPredicted RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 SLC8B1Q6J4K2 584 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 TOGARAM2Q6ZUX3 1019 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 PAQR9Q6ZVX9 377 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 TAS1R1Q7RTX1 841 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 PALB2Q86YC2 1186 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 DCP1BQ8IZD4 617 aaKnown RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 C12orf29Q8N999 325 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 ANKRD52Q8NB46 1076 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 TMEM35BQ8NCS4 154 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 OR10T2Q8NGX3 314 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 VCPIP1Q96JH7 1222 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCAP-208ENST00000448217 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
SCAP-208ENST00000448217 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
SCAP-208ENST00000448217 MYBPHLA2RUH7 354 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 CCP110O43303 1012 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 LILRB3O75022 631 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 ATP2C2O75185 946 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 MICAL2O94851 1124 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 CALCAP01258 141 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 CFHP08603 1231 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
SCAP-208ENST00000448217 GPD2P43304 727 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 GLUD2P49448 558 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 VAV2P52735 878 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 ERVK-21P61565 698 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 CREMQ03060 361 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 GPR17Q13304 367 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 ORC1Q13415 861 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
SCAP-208ENST00000448217 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 CCDC122Q5T0U0 273 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
SCAP-208ENST00000448217 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
SCAP-208ENST00000448217 PHF13Q86YI8 300 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms