RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ZNF638Q14966 1978 aaKnown RBP18.99■□□□□ 0.63
DDX56-207ENST00000448192 ZNF263O14978 683 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 HCRTO43612 131 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 EXOC3O60645 756 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 PCSK1P29120 753 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 NBL1P41271 181 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 CYP4F8P98187 520 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 PSMD6Q15008 389 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 KMT5BQ4FZB7 885 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 INTS6LQ5JSJ4 861 aaKnown RBP18.99■□□□□ 0.63
DDX56-207ENST00000448192 ZNF852Q6ZMS4 543 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 ARID3BQ8IVW6 561 aaPredicted RBP18.99■□□□□ 0.63
DDX56-207ENST00000448192 SPATA18Q8TC71 538 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 RSPRY1Q96DX4 576 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 CGRRF1Q99675 332 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 BCO2Q9BYV7 579 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 COL4A2P08572 1712 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 OBSL1O75147 1896 aa18.99■□□□□ 0.63
DDX56-207ENST00000448192 DPYSL4O14531 572 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 CYP2F1P24903 491 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 CDC25CP30307 473 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 SYKP43405 635 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 GPR15P49685 360 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 STK4Q13043 487 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 PSMD2Q13200 908 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 CCDC142Q17RM4 750 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 SDHAF4Q5VUM1 108 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 DPH6Q7L8W6 267 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 STKLD1Q8NE28 680 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 GOLGA5Q8TBA6 731 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 MMS19Q96T76 1030 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 NELL2Q99435 816 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 MKNK1Q9BUB5 465 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 OSBPL6Q9BZF3 934 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 IL21Q9HBE4 155 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 MAGED2Q9UNF1 606 aaPredicted RBP18.98■□□□□ 0.63
DDX56-207ENST00000448192 HPSEQ9Y251 543 aa18.98■□□□□ 0.63
DDX56-207ENST00000448192 ZFHX2Q9C0A1 2572 aaPredicted RBP18.98■□□□□ 0.63
DDX56-207ENST00000448192 PATJQ8NI35 1801 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 PROB1E7EW31 1015 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 GABRDO14764 452 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 CST3P01034 146 aaPredicted RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 TARSP26639 723 aaKnown RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 NDUFA8P51970 172 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 DDR2Q16832 855 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 SPATA2LQ8IUW3 424 aaPredicted RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 C1orf210Q8IVY1 113 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 C12orf56Q8IXR9 622 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 KIAA0895Q8NCT3 520 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 CSGALNACT1Q8TDX6 532 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 PKMYT1Q99640 499 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 SCAND2PQ9GZW5 306 aaPredicted RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 TASP1Q9H6P5 420 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 ABCB6Q9NP58 842 aa18.97■□□□□ 0.63
DDX56-207ENST00000448192 SPATA6Q9NWH7 488 aaPredicted RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 NDRG2Q9UN36 371 aaKnown RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 MRPS17Q9Y2R5 130 aaKnown RBP18.97■□□□□ 0.63
DDX56-207ENST00000448192 MYBPHLA2RUH7 354 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 NCAM2O15394 837 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 ATP2C2O75185 946 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 PDGFRBP09619 1106 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 HMGA1P17096 107 aaKnown RBP18.96■□□□□ 0.63
DDX56-207ENST00000448192 LMO2P25791 158 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 PSMC1P62191 440 aaKnown RBP18.96■□□□□ 0.63
DDX56-207ENST00000448192 RPL10AP62906 217 aaKnown RBP18.96■□□□□ 0.63
DDX56-207ENST00000448192 KBTBD7Q8WVZ9 684 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 ZNF516Q92618 1163 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 NKD2Q969F2 451 aaPredicted RBP18.96■□□□□ 0.63
DDX56-207ENST00000448192 SYT15Q9BQS2 421 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 TRPV5Q9NQA5 729 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 PIAS3Q9Y6X2 628 aa18.96■□□□□ 0.63
DDX56-207ENST00000448192 KIF26AQ9ULI4 1882 aaPredicted RBP18.95■□□□□ 0.62
DDX56-207ENST00000448192 MAN2B1O00754 1011 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 PHACTR2O75167 634 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 RPN1P04843 607 aaKnown RBP18.95■□□□□ 0.62
DDX56-207ENST00000448192 MYL1P05976 194 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 CSH1P0DML2 217 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 CSH2P0DML3 217 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 CASP4P49662 377 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 NLRP12P59046 1061 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 TRPC3Q13507 836 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 ASCL5Q7RTU5 278 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 LIMS2Q7Z4I7 341 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 SCN4BQ8IWT1 228 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 FSIP1Q8NA03 581 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 LRRC3BQ96PB8 259 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 SLC46A2Q9BY10 475 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 SMG9Q9H0W8 520 aaKnown RBP18.95■□□□□ 0.62
DDX56-207ENST00000448192 GZF1Q9H116 711 aaPredicted RBP18.95■□□□□ 0.62
DDX56-207ENST00000448192 SNX25Q9H3E2 840 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 GDPD2Q9HCC8 539 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 CDH9Q9ULB4 789 aa18.95■□□□□ 0.62
DDX56-207ENST00000448192 CACNA1IQ9P0X4 2223 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 PRR23AA6NEV1 266 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 SHISA7A6NL88 538 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 CHADO15335 359 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 CLSTN1O94985 981 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 PRAMEF12O95522 483 aa18.94■□□□□ 0.62
DDX56-207ENST00000448192 F11P03951 625 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms