RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IRAK3Q9Y616 596 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ASCC3Q8N3C0 2202 aaKnown RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 CACNA1DQ01668 2161 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 AHCTF1Q8WYP5 2266 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 FITM1A5D6W6 292 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 RRP8O43159 456 aaKnown RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 RHOBTB1O94844 696 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 ENGP17813 658 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 GLDCP23378 1020 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 HOXA6P31267 233 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CCDC173Q0VFZ6 552 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 PAK2Q13177 524 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 TRIM61Q5EBN2 209 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CDCP2Q5VXM1 449 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 PKN3Q6P5Z2 889 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 MTSS1LQ765P7 747 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 GRASPQ7Z6J2 395 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 ZC3H18Q86VM9 953 aaKnown RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 MMP21Q8N119 569 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 LILRA2Q8N149 483 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 ITFG1Q8TB96 612 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 SYTL5Q8TDW5 730 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 FGF13Q92913 245 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 TCTN2Q96GX1 697 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM169Q96HH4 297 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 INTS4Q96HW7 963 aaKnown RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 GTPBP2Q9BX10 602 aaKnown RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 VN1R3Q9BXE9 311 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 NT5C3AQ9H0P0 336 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CSRNP2Q9H175 543 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 ATP6V0A4Q9HBG4 840 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 CPNE5Q9HCH3 593 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 GMIPQ9P107 970 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 LAMA1P25391 3075 aa5.78□□□□□ -1.48
SDCBP-205ENST00000447267 LOC102724159A0A0B4J2E5 919 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 CLEC18AA5D8T8 446 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 C9IYK1 514 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 PLK4O00444 970 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 IDH1O75874 414 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 LUC7L3O95232 432 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 LGALS2P05162 132 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 TMEM253P0C7T8 217 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 GNAT1P11488 350 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 GBP1P32455 592 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 RARSP54136 660 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 BCAR1P56945 870 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 LINC00310P59036 64 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 RPS6P62753 249 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 MRPS6P82932 125 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 TLE3Q04726 772 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 KIR3DS1Q14943 382 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 PWP2Q15269 919 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 SLFN13Q68D06 897 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 TANGO2Q6ICL3 276 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 CLEC18BQ6UXF7 455 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 RNF207Q6ZRF8 634 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 NLRX1Q86UT6 975 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 IRF2BP1Q8IU81 584 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 HDDC3Q8N4P3 179 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 CLEC18CQ8NCF0 446 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 GIPC2Q8TF65 315 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 STAG1Q8WVM7 1258 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 CLEC4DQ8WXI8 215 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 RIOK1Q9BRS2 568 aaKnown RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 SGPP1Q9BX95 441 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 TMEM117Q9H0C3 514 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 FAM49AQ9H0Q0 323 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-205ENST00000447267 TELO2Q9Y4R8 837 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 PIAS3Q9Y6X2 628 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 NF1P21359 2839 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 NID2Q14112 1375 aa5.77□□□□□ -1.49
SDCBP-205ENST00000447267 USP9YO00507 2555 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 MYH7BA7E2Y1 1941 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 DENND3A2RUS2 1198 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 PRKAB2O43741 272 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 SOX9P48436 509 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 STAT2P52630 851 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 LMAN2Q12907 356 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 GIT2Q14161 759 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 IGFBP7Q16270 282 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 CLEC16AQ2KHT3 1053 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 SEZ6Q53EL9 994 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 CYP26C1Q6V0L0 522 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 GK5Q6ZS86 529 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 KCTD1Q719H9 257 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 SLC24A5Q71RS6 500 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 DDX53Q86TM3 631 aaKnown RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 OXR1Q8N573 874 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 DAGLBQ8NCG7 672 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 ING5Q8WYH8 240 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 TBC1D5Q92609 795 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 EAF1Q96JC9 268 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 TAAR1Q96RJ0 339 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 MPHOSPH6Q99547 160 aaKnown RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 PRDM14Q9GZV8 571 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 USP44Q9H0E7 712 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms