RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 UMODL1Q5DID0 1318 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 KCTD19Q17RG1 926 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 OSGEPQ9NPF4 335 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 DCDC2Q9UHG0 476 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 BCS1LQ9Y276 419 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ARHGEF40Q8TER5 1519 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 MFN2O95140 757 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CHEK2O96017 543 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 GZMAP12544 262 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CDK8P49336 464 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CEP78Q5JTW2 689 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 MIIPQ5JXC2 388 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PCYOX1LQ8NBM8 494 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 GCNAQ96QF7 691 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 TUBGCP5Q96RT8 1024 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ACAD10Q6JQN1 1059 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ZNF398Q8TD17 642 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 DCAF4Q8WV16 495 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 KAZALD1Q96I82 304 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 SLCO1B3Q9NPD5 702 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 FXR2P51116 673 aaKnown RBP eCLIP8.2□□□□□ -1.12e-7■■■■□ 19.6
SMG1-202ENST00000446231 RAD23AP54725 363 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 THOC7Q6I9Y2 204 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 SLFN12LQ6IEE8 588 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CDRT15Q96T59 188 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PLA2G12BQ9BX93 195 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 EFCAB1Q9HAE3 211 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 DAPK2Q9UIK4 370 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 FAAP100Q0VG06 881 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PTK6Q13882 451 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CCNG2Q16589 344 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 SFRP1Q8N474 314 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PIDD1Q9HB75 910 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 NXF1Q9UBU9 619 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 PALLDQ8WX93 1383 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 IDH3BO43837 385 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 APRTP07741 180 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CLK1P49759 484 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 MTM1Q13496 603 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 PKN2Q16513 984 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ENDOVQ8N8Q3 282 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 TDRD5Q8NAT2 981 aaKnown RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 SYT15Q9BQS2 421 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 DCP1AQ9NPI6 582 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 FCGR1AP12314 374 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 POLD3Q15054 466 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 SLC26A11Q86WA9 606 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 DEPDC7Q96QD5 511 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 TRIM39Q9HCM9 518 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 HEY1Q9Y5J3 304 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ARPC4P59998 168 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 WASHC5Q12768 1159 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 AAGABQ6PD74 315 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 ALG3Q92685 438 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 AP3B1O00203 1094 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 TPBGLP0DKB5 382 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 TAP1Q03518 808 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 GRB10Q13322 594 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 MAPK11Q15759 364 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 CDKL3Q8IVW4 592 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 CCNYQ8ND76 341 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 SENP7Q9BQF6 1050 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 SEMA6AQ9H2E6 1030 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
SMG1-202ENST00000446231 KIF17Q9P2E2 1029 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 GTF3C4Q9UKN8 822 aa8.2□□□□□ -1.1
SMG1-202ENST00000446231 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP1O94782 785 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SYDE2Q5VT97 1194 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 APBB2Q92870 758 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SUN2Q9UH99 717 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 GTPBP10A4D1E9 387 aaKnown RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 ABHD2P08910 425 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 FDFT1P37268 417 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 CCR3P51677 355 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 GIN1Q9NXP7 522 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 GMEB1Q9Y692 573 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 WDR47O94967 919 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 COL9A3Q14050 684 aaPredicted RBP8.19□□□□□ -1.1
SMG1-202ENST00000446231 SCFD1Q8WVM8 642 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 GLMNQ92990 594 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 ALBP02768 609 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 CLNKQ7Z7G1 428 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SGPL1O95470 568 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 SPATA18Q8TC71 538 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 AGR3Q8TD06 166 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TELO2Q9Y4R8 837 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
SMG1-202ENST00000446231 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms