RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 SNTG2Q9NY99 539 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 CALCOCO1Q9P1Z2 691 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 GINS2Q9Y248 185 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 PPME1Q9Y570 386 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 PRRG1O14668 218 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 NFATC1O95644 943 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 MPOP05164 745 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 HNRNPLP14866 589 aaKnown RBP eCLIP7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 NLRP11P59045 1033 aaKnown RBP7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 PPARAQ07869 468 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 ZRANB3Q5FWF4 1079 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 NUDT18Q6ZVK8 323 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 DGKHQ86XP1 1220 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 SMARCC2Q8TAQ2 1214 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 APPBP2Q92624 585 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 TCTN2Q96GX1 697 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 TMEM206Q9H813 350 aa7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 ERRFI1Q9UJM3 462 aaPredicted RBP7.1□□□□□ -1.27
BRAFP1-201ENST00000445336 NVLO15381 856 aaKnown RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 TRAPPC3O43617 180 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 KLF8O95600 359 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 ITGAVP06756 1048 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 HEXAP06865 529 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 NCAM1P13591 858 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 KIR2DL1P43626 348 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 RNASE9P60153 205 aaKnown RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 PPP2R2AP63151 447 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 TUSC3Q13454 348 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 ISXQ2M1V0 245 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 ADGRF4Q8IZF3 695 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 CPT1CQ8TCG5 803 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 STARD13Q9Y3M8 1113 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 IPPQ9Y573 584 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 PCDHB1Q9Y5F3 818 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SNX11Q9Y5W9 270 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 A0A1B0GVT2 93 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 H0Y8X5 98 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 GOLIM4O00461 696 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SYN3O14994 580 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SORBS3O60504 671 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SHOX2O60902 331 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 APODP05090 189 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 MYL4P12829 197 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SKOR2Q2VWA4 1001 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 KDM7AQ6ZMT4 941 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 LPPQ93052 612 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 JPH2Q9BR39 696 aaPredicted RBP7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 TRIM8Q9BZR9 551 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 PCDHGB7Q9Y5F8 929 aa7.09□□□□□ -1.27
BRAFP1-201ENST00000445336 EPHA8P29322 1005 aaPredicted RBP7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SIRT2Q8IXJ6 389 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SPRYD3Q8NCJ5 442 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 HMGB4Q8WW32 186 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ELF4Q99607 663 aaPredicted RBP7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 GABRG3Q99928 467 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SEMA6CQ9H3T2 930 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 FBRSL1Q9HCM7 1045 aaKnown RBP7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 DISC1Q9NRI5 854 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SDK1Q7Z5N4 2213 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 LRBAP50851 2863 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 A0A1W2PQ27 194 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 A0A1W2PQ64 194 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 A0A1W2PQC6 194 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ZBTB5O15062 677 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SCAMP1O15126 338 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ATP5JP18859 108 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 GRIA2P42262 883 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ALDH1A3P47895 512 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ACTR2P61160 394 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 SEPT6Q14141 434 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 RRP12Q5JTH9 1297 aaKnown RBP7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 DCAF12L1Q5VU92 463 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 NIPA1Q7RTP0 329 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 EXOC8Q8IYI6 725 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 IFNL3Q8IZI9 196 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 GCNAQ96QF7 691 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 MEIS3Q99687 375 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 EFHD1Q9BUP0 239 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 CDT1Q9H211 546 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ITM2CQ9NQX7 267 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 AKT3Q9Y243 479 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 PCDHA8Q9Y5H6 950 aa7.08□□□□□ -1.28
BRAFP1-201ENST00000445336 ZNF891A8MT65 544 aaPredicted RBP7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 SGK1O00141 431 aa7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 N4BP3O15049 544 aa7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 HOXA13P31271 388 aaPredicted RBP7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 EPHB3P54753 998 aa7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 ROR1Q01973 937 aa7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 MRPL58Q14197 206 aaKnown RBP7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
BRAFP1-201ENST00000445336 MIS18BP1Q6P0N0 1132 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms