RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 FOXN3O00409 490 aaPredicted RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 ABLIM3O94929 683 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 ITGB1P05556 798 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 GZMAP12544 262 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 CASP14P31944 242 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 GPR17Q13304 367 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 OVOS1Q6IE37 1185 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 CYP26C1Q6V0L0 522 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 TMTC1Q8IUR5 882 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SPPL3Q8TCT6 385 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SPAG5Q96R06 1193 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 GPR62Q9BZJ7 368 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SNX25Q9H3E2 840 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 DENND4AQ7Z401 1863 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 DPYSL4O14531 572 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 LRRN2O75325 713 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 UPP2O95045 317 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 HOXA9P31269 272 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 KRT9P35527 623 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 GNL1P36915 607 aaPredicted RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 NDUFV1P49821 464 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 NDST1P52848 882 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 CDR2Q01850 454 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 PTK2Q05397 1052 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 PTPN14Q15678 1187 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 ASIC2Q16515 512 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 WSCD1Q658N2 575 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 WDR59Q6PJI9 974 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 VSTM1Q6UX27 236 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 SPPL2BQ8TCT7 592 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 IL37Q9NZH6 218 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 PUF60Q9UHX1 559 aaKnown RBP9.33□□□□□ -0.92
FXR1-203ENST00000445140 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.33□□□□□ -0.92
FXR1-203ENST00000445140 CENPFP49454 3210 aa9.33□□□□□ -0.92
FXR1-203ENST00000445140 LCHNA4D1U4 455 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 SOBPA7XYQ1 873 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 RNF225M0QZC1 329 aaPredicted RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 O00370 1275 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 URODP06132 367 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 CYP11B1P15538 503 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 TKTP29401 623 aaKnown RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 BRCC3P46736 316 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 TSPY1Q01534 308 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 PAN2Q504Q3 1202 aaKnown RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 C4orf50Q6ZRC1 276 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 BEND5Q7L4P6 421 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 ARCQ7LC44 396 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 ZNF276Q8N554 614 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 B3GALNT2Q8NCR0 500 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 KCTD13Q8WZ19 329 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 KAT5Q92993 513 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 SPATA17Q96L03 361 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 SYT15Q9BQS2 421 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 PCDHB4Q9Y5E5 795 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 BTNL10A8MVZ5 291 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 PES1O00541 588 aaKnown RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 PDE6CP51160 858 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 TMEM184AQ6ZMB5 413 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 FAM84AQ96KN4 292 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 C8orf48Q96LL4 319 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 MIS12Q9H081 205 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 DDX43Q9NXZ2 648 aaKnown RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 AFF4Q9UHB7 1163 aaKnown RBP9.32□□□□□ -0.92
FXR1-203ENST00000445140 LCMT1Q9UIC8 334 aa9.32□□□□□ -0.92
FXR1-203ENST00000445140 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 CA3P07451 260 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 PTPN1P18031 435 aaKnown RBP9.31□□□□□ -0.92
FXR1-203ENST00000445140 CTNNB1P35222 781 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 GABRB2P47870 512 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 CENPCQ03188 943 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 RTP2Q5QGT7 225 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 LILRA6Q6PI73 481 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 RRAGAQ7L523 313 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
FXR1-203ENST00000445140 CREBRFQ8IUR6 639 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 CMASQ8NFW8 434 aaPredicted RBP9.31□□□□□ -0.92
FXR1-203ENST00000445140 TIFAQ96CG3 184 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 CRTAC1Q9NQ79 661 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 TLR9Q9NR96 1032 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
FXR1-203ENST00000445140 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
FXR1-203ENST00000445140 PRG3Q9Y2Y8 225 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms