RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 PI4K2AQ9BTU6 479 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 DPEP3Q9H4B8 488 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 PCDHB5Q9Y5E4 795 aa23.37■■□□□ 1.33
TRAF4-205ENST00000444415 ZFP37Q9Y6Q3 630 aaPredicted RBP23.37■■□□□ 1.33
TRAF4-205ENST00000444415 PRR33A8MZF0 331 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 ASS1P00966 412 aaKnown RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 HLA-DRAP01903 254 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 PDGFRBP09619 1106 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 PCSK1P29120 753 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 RAP1GAPP47736 663 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 ALDH1A3P47895 512 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 CDH8P55286 799 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 LRRC63Q05C16 580 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 TDGQ13569 410 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 TTI2Q6NXR4 508 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 GAREM2Q75VX8 874 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 PDZD4Q76G19 769 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 DNAJB7Q7Z6W7 309 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 SLC44A3Q8N4M1 653 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 GPR152Q8TDT2 470 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 MCRS1Q96EZ8 462 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 ZSWIM3Q96MP5 696 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 ASAH2Q9NR71 780 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 LMBRD1Q9NUN5 540 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 DUSP12Q9UNI6 340 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 NCANO14594 1321 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 TMEM221A6NGB7 291 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 M0R296 226 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 CETN3O15182 167 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 FCARP24071 287 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 CYP2F1P24903 491 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 TUFMP49411 452 aaKnown RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 EPHB3P54753 998 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 TNNC1P63316 161 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 PLD1Q13393 1074 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 NFE2Q16621 373 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 IQCEQ6IPM2 695 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 UBALD2Q8IYN6 164 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 ELMOD1Q8N336 334 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 IL21Q9HBE4 155 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 APOBEC3GQ9HC16 384 aaKnown RBP23.36■■□□□ 1.33
TRAF4-205ENST00000444415 KIAA1468Q9P260 1216 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 CDH9Q9ULB4 789 aa23.36■■□□□ 1.33
TRAF4-205ENST00000444415 KMT2EQ8IZD2 1858 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 MICAL2O94851 1124 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 PDGFBP01127 241 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-205ENST00000444415 MYL4P12829 197 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 HMGA1P17096 107 aaKnown RBP23.35■■□□□ 1.33
TRAF4-205ENST00000444415 FKBP3Q00688 224 aaKnown RBP23.35■■□□□ 1.33
TRAF4-205ENST00000444415 CFAP221Q4G0U5 840 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 SDHAF4Q5VUM1 108 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 SCARA5Q6ZMJ2 495 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 GIPC2Q8TF65 315 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 MYLPFQ96A32 169 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 DHTKD1Q96HY7 919 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-205ENST00000444415 GTPBP4Q9BZE4 634 aaKnown RBP23.35■■□□□ 1.33
TRAF4-205ENST00000444415 ABCB6Q9NP58 842 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.35■■□□□ 1.332e-6■■■■■ 58.1
TRAF4-205ENST00000444415 TMEM30AQ9NV96 361 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 COL4A3Q01955 1670 aa23.35■■□□□ 1.33
TRAF4-205ENST00000444415 NUP210Q8TEM1 1887 aaPredicted RBP23.34■■□□□ 1.33
TRAF4-205ENST00000444415 DMDP11532 3685 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 PSMA7O14818 248 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 SLC16A3O15427 465 aaKnown RBP23.34■■□□□ 1.33
TRAF4-205ENST00000444415 FAM163BP0C2L3 166 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 KRT13P13646 458 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 GNL1P36915 607 aaPredicted RBP23.34■■□□□ 1.33
TRAF4-205ENST00000444415 ASPAP45381 313 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 TEAD2Q15562 447 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 ZNF667Q5HYK9 610 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 STXBP5Q5T5C0 1151 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 KLHL10Q6JEL2 608 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 SEMA4DQ92854 862 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 MED15Q96RN5 788 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 TSG101Q99816 390 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 MMRN2Q9H8L6 949 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 TMEM8AQ9HCN3 771 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 GDE1Q9NZC3 331 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 RAPGEFL1Q9UHV5 662 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 ASB3Q9Y575 518 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 ZNF638Q14966 1978 aaKnown RBP23.34■■□□□ 1.33
TRAF4-205ENST00000444415 ANAPC1Q9H1A4 1944 aa23.34■■□□□ 1.33
TRAF4-205ENST00000444415 A0A1W2PRU2 124 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 EPB41P11171 864 aaKnown RBP23.33■■□□□ 1.33
TRAF4-205ENST00000444415 PIK3CAP42336 1068 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 DDR2Q16832 855 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 SGSM1Q2NKQ1 1148 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 CBWD6Q4V339 395 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 CBWD3Q5JTY5 395 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 CBWD5Q5RIA9 395 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 CYP4A22Q5TCH4 519 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 TMEM150AQ86TG1 271 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 LEMD2Q8NC56 503 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 OR6B3Q8NGW1 331 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 NELFBQ8WX92 580 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 NXPE3Q969Y0 559 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 PCED1BQ96HM7 432 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 PLA2G2FQ9BZM2 168 aa23.33■■□□□ 1.33
TRAF4-205ENST00000444415 HMGXB4Q9UGU5 601 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms