RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PJA1Q8NG27 643 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 DEPDC1BQ8WUY9 529 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 DNASE1L2Q92874 299 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 IRF7Q92985 503 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 TRPV4Q9HBA0 871 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 GDPD2Q9HCC8 539 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 GTF3C4Q9UKN8 822 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 HEPACAM2A8MVW5 462 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 DPYSL4O14531 572 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 ZNF263O14978 683 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 KIF20AO95235 890 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 RPL10AP62906 217 aaKnown RBP21.52■■□□□ 1.04
LRCH3-208ENST00000443727 ANGPT1Q15389 498 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 GPIHBP1Q8IV16 184 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 CCDC34Q96HJ3 373 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 ABCB6Q9NP58 842 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 HEBP1Q9NRV9 189 aa21.52■■□□□ 1.04
LRCH3-208ENST00000443727 FAM237AA0A1B0GTK4 181 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 FAM170BA6NMN3 283 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 GABRDO14764 452 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 CD72P21854 359 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 CYP2F1P24903 491 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 TNNC1P63316 161 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 BIRC3Q13489 604 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 ZNF852Q6ZMS4 543 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 KRBA2Q6ZNG9 492 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 ARID3BQ8IVW6 561 aaPredicted RBP21.51■■□□□ 1.03
LRCH3-208ENST00000443727 MFSD6LQ8IWD5 586 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 SYT15Q9BQS2 421 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 DDX23Q9BUQ8 820 aaKnown RBP21.51■■□□□ 1.03
LRCH3-208ENST00000443727 SNX25Q9H3E2 840 aa21.51■■□□□ 1.03
LRCH3-208ENST00000443727 MAGED2Q9UNF1 606 aaPredicted RBP21.51■■□□□ 1.03
LRCH3-208ENST00000443727 MRPS17Q9Y2R5 130 aaKnown RBP21.51■■□□□ 1.03
LRCH3-208ENST00000443727 GOLGA6L4A6NEF3 574 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 PDXKO00764 312 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 HCRTO43612 131 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 CST3P01034 146 aaPredicted RBP21.5■■□□□ 1.03
LRCH3-208ENST00000443727 PDGFRBP09619 1106 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 GPR15P49685 360 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 CYP4F8P98187 520 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 DDR2Q16832 855 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 WDR72Q3MJ13 1102 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 SDHAF4Q5VUM1 108 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 C4orf50Q6ZRC1 276 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 SCN4BQ8IWT1 228 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 BCO2Q9BYV7 579 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 GOLPH3LQ9H4A5 285 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 TASP1Q9H6P5 420 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 CDH9Q9ULB4 789 aa21.5■■□□□ 1.03
LRCH3-208ENST00000443727 MYBPHLA2RUH7 354 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 CALUO43852 315 aaPredicted RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 LRRN2O75325 713 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 ZNF202O95125 648 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 NR3C1P04150 777 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 PRR29P0C7W0 189 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 CSH1P0DML2 217 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 CSH2P0DML3 217 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 WARSP23381 471 aaKnown RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 LMO2P25791 158 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 CASP4P49662 377 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 PSMC1P62191 440 aaKnown RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 NUCB2P80303 420 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 MAPRE1Q15691 268 aaKnown RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 KBTBD7Q8WVZ9 684 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 ZNF516Q92618 1163 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 NELL2Q99435 816 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 PKMYT1Q99640 499 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 KCTD10Q9H3F6 313 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 LTB4R2Q9NPC1 389 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 NXF1Q9UBU9 619 aaKnown RBP21.49■■□□□ 1.03
LRCH3-208ENST00000443727 FRMD4BQ9Y2L6 1034 aa21.49■■□□□ 1.03
LRCH3-208ENST00000443727 NCAM2O15394 837 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 ATP2C2O75185 946 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 GNL1P36915 607 aaPredicted RBP21.48■■□□□ 1.03
LRCH3-208ENST00000443727 AP3M2P53677 418 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 MYL6P60660 151 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 DPYDQ12882 1025 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 CCDC142Q17RM4 750 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 CFAP221Q4G0U5 840 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 CEP135Q66GS9 1140 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 LIMS2Q7Z4I7 341 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 SLC9A9Q8IVB4 645 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 STKLD1Q8NE28 680 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 OR6B3Q8NGW1 331 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 CSGALNACT1Q8TDX6 532 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 FUBP3Q96I24 572 aaKnown RBP eCLIP21.48■■□□□ 1.03
LRCH3-208ENST00000443727 OSBPL6Q9BZF3 934 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 IL21Q9HBE4 155 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 DMAC2Q9NW81 257 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 MAGEC2Q9UBF1 373 aaPredicted RBP21.48■■□□□ 1.03
LRCH3-208ENST00000443727 ZMYM5Q9UJ78 669 aa21.48■■□□□ 1.03
LRCH3-208ENST00000443727 MTF2Q9Y483 593 aaPredicted RBP21.48■■□□□ 1.03
LRCH3-208ENST00000443727 MAN2B1O00754 1011 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 RHOBTB3O94955 611 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 HMGA1P17096 107 aaKnown RBP21.47■■□□□ 1.03
LRCH3-208ENST00000443727 ATICP31939 592 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 NLRP12P59046 1061 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 CYP27A1Q02318 531 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 FAM171BQ6P995 826 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms