RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ZNF788Q6ZQV5 615 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 GRAMD1CQ8IYS0 662 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 FAM136AQ96C01 138 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 EVI5LQ96CN4 794 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 MVB12AQ96EY5 273 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 FAM167AQ96KS9 214 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 OSBPL9Q96SU4 736 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 ALG8Q9BVK2 526 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 EHD3Q9NZN3 535 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 DKK3Q9UBP4 350 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 PNMA2Q9UL42 364 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 ANKRD6Q9Y2G4 727 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 FRMD4BQ9Y2L6 1034 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 WDHD1O75717 1129 aaPredicted RBP5.77□□□□□ -1.49
VPS50-206ENST00000443443 PDGFRBP09619 1106 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 EBLN1P0CF75 366 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 PF4V1P10720 104 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 WT1P19544 449 aaPredicted RBP5.77□□□□□ -1.49
VPS50-206ENST00000443443 AKAP5P24588 427 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 ABCG1P45844 678 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 NEK2P51955 445 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 SOX10P56693 466 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 SRSF4Q08170 494 aaKnown RBP5.77□□□□□ -1.49
VPS50-206ENST00000443443 AMOTQ4VCS5 1084 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 VPS53Q5VIR6 699 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 FAM160B1Q5W0V3 765 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 LAYNQ6UX15 382 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 TMEM108Q6UXF1 575 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 BRIX1Q8TDN6 353 aaKnown RBP5.77□□□□□ -1.49
VPS50-206ENST00000443443 SARAFQ96BY9 339 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 HOOK2Q96ED9 719 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 PBKQ96KB5 322 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 MAP3K14Q99558 947 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 TTYH3Q9C0H2 523 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 MAF1Q9H063 256 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 ARMT1Q9H993 441 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 TYW1Q9NV66 732 aaKnown RBP5.77□□□□□ -1.49
VPS50-206ENST00000443443 TCEAL9Q9UHQ7 104 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 PCDHA6Q9UN73 950 aa5.77□□□□□ -1.49
VPS50-206ENST00000443443 WDR27A2RRH5 827 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 MANSC4A6NHS7 340 aaPredicted RBP5.76□□□□□ -1.49
VPS50-206ENST00000443443 GCOM1H8Y6P7 765 aaPredicted RBP5.76□□□□□ -1.49
VPS50-206ENST00000443443 PPM1DO15297 605 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 NDUFB7P17568 137 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 HDCP19113 662 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 CCT8P50990 548 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 BMPR2Q13873 1038 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 PLS1Q14651 629 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 ODR4Q5SWX8 454 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 RFKQ969G6 155 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 SLC35A4Q96G79 324 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 CDK5RAP3Q96JB5 506 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 SLC46A1Q96NT5 459 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 NELL2Q99435 816 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 SARS2Q9NP81 518 aaKnown RBP5.76□□□□□ -1.49
VPS50-206ENST00000443443 CPA4Q9UI42 421 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 PADI4Q9UM07 663 aa5.76□□□□□ -1.49
VPS50-206ENST00000443443 PDHA1P08559 390 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 FAM163BP0C2L3 166 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 ALDH9A1P49189 494 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 TOB1P50616 345 aaPredicted RBP5.75□□□□□ -1.49
VPS50-206ENST00000443443 FOXD4Q12950 439 aaPredicted RBP5.75□□□□□ -1.49
VPS50-206ENST00000443443 BOP1Q14137 746 aaKnown RBP5.75□□□□□ -1.49
VPS50-206ENST00000443443 TMEM119Q4V9L6 283 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 IFIT1BQ5T764 474 aaKnown RBP5.75□□□□□ -1.49
VPS50-206ENST00000443443 FAM9BQ8IZU0 186 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS50-206ENST00000443443 STAG1Q8WVM7 1258 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 ATRIPQ8WXE1 791 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 MTFMTQ96DP5 389 aaKnown RBP5.75□□□□□ -1.49
VPS50-206ENST00000443443 ARHGEF3Q9NR81 526 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 COMMD10Q9Y6G5 202 aa5.75□□□□□ -1.49
VPS50-206ENST00000443443 OFD1O75665 1012 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 HNRNPCP07910 306 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS50-206ENST00000443443 PIM1P11309 404 aaPredicted RBP5.74□□□□□ -1.49
VPS50-206ENST00000443443 SOX8P57073 446 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 NKX6-1P78426 367 aaPredicted RBP5.74□□□□□ -1.49
VPS50-206ENST00000443443 WDR78Q5VTH9 848 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 FCRLBQ6BAA4 426 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 KRBA2Q6ZNG9 492 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 PTF1AQ7RTS3 328 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 PPP1R32Q7Z5V6 425 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 KLHDC4Q8TBB5 520 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 HPS3Q969F9 1004 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 C8orf48Q96LL4 319 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 CNNM1Q9NRU3 951 aa5.74□□□□□ -1.49
VPS50-206ENST00000443443 AP1G1O43747 822 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 PLIN1O60240 522 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 ALDH1L1O75891 902 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 UNC5CO95185 931 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 ALDH2P05091 517 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 ITPKBP27987 946 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 PXNP49023 591 aaPredicted RBP5.73□□□□□ -1.49
VPS50-206ENST00000443443 ZNF134P52741 427 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 PROK1P58294 105 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 TCF15Q12870 199 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 IQCB1Q15051 598 aa5.73□□□□□ -1.49
VPS50-206ENST00000443443 ICE2Q659A1 982 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms