RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 DUS2Q9NX74 493 aaKnown RBP15.11■□□□□ 0.01
LINC00642-202ENST00000442515 MBD1Q9UIS9 605 aaPredicted RBP15.11■□□□□ 0.01
LINC00642-202ENST00000442515 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.11■□□□□ 0.01
LINC00642-202ENST00000442515 HELZ2Q9BYK8 2649 aaKnown RBP15.11■□□□□ 0.01
LINC00642-202ENST00000442515 ATG2BQ96BY7 2078 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 TTC26A0AVF1 554 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 ANTXRLA6NF34 631 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 SLC16A4O15374 487 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 PFKFB2O60825 505 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 REC8O95072 547 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 F11P03951 625 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 HMGA1P17096 107 aaKnown RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 CCT6AP40227 531 aaKnown RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 ATXN3P54252 364 aaPredicted RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 LILRA4P59901 499 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 ZNF77Q15935 545 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 CRY1Q16526 586 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 C2orf27AQ580R0 203 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 SLC23A3Q6PIS1 610 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 MON1AQ86VX9 555 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 TTC30AQ86WT1 665 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 TMEFF1Q8IYR6 380 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 TTC16Q8NEE8 873 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 RLN3Q8WXF3 142 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 MRPS31Q92665 395 aaKnown RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 ATP2A3Q93084 1043 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 YTHDC1Q96MU7 727 aaKnown RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 CIZ1Q9ULV3 898 aaPredicted RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 MMP17Q9ULZ9 603 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
LINC00642-202ENST00000442515 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
LINC00642-202ENST00000442515 ADAMTS20P59510 1910 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 TADA3O75528 432 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 CFIP05156 583 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 OR52Z1P0C646 297 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 HAPLN1P10915 354 aaPredicted RBP15.09■□□□□ 0.01
LINC00642-202ENST00000442515 HNRNPLP14866 589 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00642-202ENST00000442515 P2RY2P41231 377 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 IFNAR2P48551 515 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 FOSBP53539 338 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 MCL1Q07820 350 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 STRN3Q13033 797 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 USP4Q13107 963 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 MAPK7Q13164 816 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 EML3Q32P44 896 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 PEAR1Q5VY43 1037 aaPredicted RBP15.09■□□□□ 0.01
LINC00642-202ENST00000442515 LYSMD4Q5XG99 296 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 CCDC33Q8N5R6 958 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 STKLD1Q8NE28 680 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 DRC1Q96MC2 740 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 RUSC1Q9BVN2 902 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 GTPBP2Q9BX10 602 aaKnown RBP15.09■□□□□ 0.01
LINC00642-202ENST00000442515 TM6SF1Q9BZW5 370 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 HAPLN2Q9GZV7 340 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 ABI2Q9NYB9 513 aaPredicted RBP15.09■□□□□ 0.01
LINC00642-202ENST00000442515 NUP205Q92621 2012 aa15.09■□□□□ 0.01
LINC00642-202ENST00000442515 EIF4E1BA6NMX2 242 aaKnown RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 K7EQS6 105 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 CLDN3O15551 220 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 ALDH1A2O94788 518 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 CLTAP09496 248 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 TNFSF9P41273 254 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 LMBRD2Q68DH5 695 aaPredicted RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 TMEM92Q6UXU6 159 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 SPPL2BQ8TCT7 592 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 WHAMMQ8TF30 809 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 C2orf15Q8WU43 125 aaKnown RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 CCDC86Q9H6F5 360 aaKnown RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 DDX19AQ9NUU7 478 aaKnown RBP15.08■□□□□ 0
LINC00642-202ENST00000442515 PILRBQ9UKJ0 227 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 KIAA1024Q9UPX6 916 aa15.08■□□□□ 0
LINC00642-202ENST00000442515 LACTBL1A8MY62 500 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 MAP3K13O43283 966 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 OPHN1O60890 802 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 CYP11A1P05108 521 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
LINC00642-202ENST00000442515 ITPKAP23677 461 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 HOXD12P35452 270 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 DPP6P42658 865 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00642-202ENST00000442515 GPR15P49685 360 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 ZPBP2Q6X784 338 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 LRRTM3Q86VH5 581 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 EFCAB13Q8IY85 973 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 MDM1Q8TC05 714 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 ADAM32Q8TC27 787 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 HNRNPLLQ8WVV9 542 aaKnown RBP15.07■□□□□ 0
LINC00642-202ENST00000442515 SLC22A12Q96S37 553 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 C17orf75Q9HAS0 396 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 TRPC7Q9HCX4 862 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 SLC6A14Q9UN76 642 aa15.07■□□□□ 0
LINC00642-202ENST00000442515 MAGED2Q9UNF1 606 aaPredicted RBP15.07■□□□□ 0
LINC00642-202ENST00000442515 RAXQ9Y2V3 346 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms