RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 TMLHEQ9NVH6 421 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 GTF3C4Q9UKN8 822 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 SPTBN5Q9NRC6 3674 aaKnown RBP16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 A8MXQ7 604 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 DLL1O00548 723 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 MICAL2O94851 1124 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 RHOP08100 348 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 FSHRP23945 695 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 MAGEA11P43364 429 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 ASPAP45381 313 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 EPHA5P54756 1037 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 INCA1Q0VD86 236 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 MGAT5BQ3V5L5 792 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 ITIH5Q86UX2 942 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 MYCBPAPQ8TBZ2 947 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 SEMA4DQ92854 862 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 CEP295NLQ96MC4 621 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 PI4K2AQ9BTU6 479 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 CD320Q9NPF0 282 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 ABI2Q9NYB9 513 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 TMEM63CQ9P1W3 806 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 CEP72Q9P209 647 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 SLC27A5Q9Y2P5 690 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 NME7Q9Y5B8 376 aa16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
CSNK1E-210ENST00000442216 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 OBSL1O75147 1896 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 MYBPHLA2RUH7 354 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 ZNF197O14709 1029 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 HCRTO43612 131 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 CDH8P55286 799 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 RPL10AP62906 217 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 VEPH1Q14D04 833 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 KLHL40Q2TBA0 621 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 SCARA5Q6ZMJ2 495 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 SPATA2LQ8IUW3 424 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 CRYBG2Q8N1P7 616 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 TTC9BQ8N6N2 239 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 PSMG2Q969U7 264 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 CNOT6LQ96LI5 555 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 SEPT5Q99719 369 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 SDCBP2Q9H190 292 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 DNAJC25Q9H1X3 360 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 HCFC1R1Q9NWW0 138 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 EPS15L1Q9UBC2 864 aa16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-210ENST00000442216 ATP2C2O75185 946 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 FGF19O95750 216 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 AFPP02771 609 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 RAP1GAPP47736 663 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 STX1AQ16623 288 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 CYP4A22Q5TCH4 519 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 ENOX1Q8TC92 643 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 PCED1BQ96HM7 432 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 CORO1BQ9BR76 489 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 ASAH2Q9NR71 780 aa16.03■□□□□ 0.16
CSNK1E-210ENST00000442216 C5orf42Q9H799 3197 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 TTC28Q96AY4 2481 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 LRRN2O75325 713 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 ATF6P18850 670 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 TBXAS1P24557 533 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 CYP2F1P24903 491 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 GBP2P32456 591 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 NDST1P52848 882 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 NTHL1P78549 312 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 PRSS36Q5K4E3 855 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 PDZD4Q76G19 769 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 GET4Q7L5D6 327 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 DNAJB7Q7Z6W7 309 aaPredicted RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 NXPE3Q969Y0 559 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 MYLPFQ96A32 169 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 ELMO3Q96BJ8 720 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 MYADMQ96S97 322 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 LRRC3Q9BY71 257 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 GDE1Q9NZC3 331 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms