RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SNX9Q9Y5X1 595 aa13.92□□□□□ -0.18
CPSF4-206ENST00000441580 TRIP12Q14669 1992 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-206ENST00000441580 KIF3CO14782 793 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 GAS8O95995 478 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 PSMA2P25787 234 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 HOXD10P28358 340 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-206ENST00000441580 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
CPSF4-206ENST00000441580 RAB27AP51159 221 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 ACAP1Q15027 740 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 GOLGA7BQ2TAP0 167 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 ODF2Q5BJF6 829 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 GLRA4Q5JXX5 417 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 CYP4A22Q5TCH4 519 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 DUPD1Q68J44 220 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 AADACL2Q6P093 401 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
CPSF4-206ENST00000441580 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 XYLT1Q86Y38 959 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 TRIM51Q9BSJ1 452 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 GDAP2Q9NXN4 497 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 HESX1Q9UBX0 185 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 FEZ2Q9UHY8 353 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-206ENST00000441580 TSPAN16Q9UKR8 245 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 HES2Q9Y543 173 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
CPSF4-206ENST00000441580 SMIM28A0A1B0GU29 152 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 GOLGA8KD6RF30 607 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 GOLGA8SH3BPF8 625 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 PIRO00625 290 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 DAPK3O43293 454 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CAND2O75155 1236 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 RPS6KA5O75582 802 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CABYRO75952 493 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 PGK1P00558 417 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 ERBB2P04626 1255 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 KRT7P08729 469 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 RARAP10276 462 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 KRT3P12035 628 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 LRPAP1P30533 357 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 GJC1P36383 396 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 PTGIRP43119 386 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 TAS2R40P59535 323 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 RPL7AP62424 266 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 SP3Q02447 781 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CACNB2Q08289 660 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 KLF1Q13351 362 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 ORC1Q13415 861 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 HADHQ16836 314 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CFAP58Q5T655 872 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 LRIG3Q6UXM1 1119 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 ZDHHC17Q8IUH5 632 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CCDC105Q8IYK2 499 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 RCOR2Q8IZ40 523 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 TOP6BLQ8N6T0 577 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 C18orf25Q96B23 403 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 MCRS1Q96EZ8 462 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 GDAP1L1Q96MZ0 367 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CPXM1Q96SM3 734 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 ZIC5Q96T25 663 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 FMO2Q99518 471 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 OSBPL8Q9BZF1 889 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 CYLDQ9NQC7 956 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 METTL5Q9NRN9 209 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
CPSF4-206ENST00000441580 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
CPSF4-206ENST00000441580 GPR182O15218 404 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 GNRH1P01148 92 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 AKAP5P24588 427 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 SCNN1AP37088 669 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 GPD2P43304 727 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 BCAT1P54687 386 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 LMNB2Q03252 620 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 MGAT3Q09327 533 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 GDF6Q6KF10 455 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-206ENST00000441580 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 CAPNS2Q96L46 248 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 SLITRK1Q96PX8 696 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 NCAPGQ9BPX3 1015 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
CPSF4-206ENST00000441580 FRMD8P1Q9BZ68 369 aaPredicted RBP13.89□□□□□ -0.19
CPSF4-206ENST00000441580 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 DPH5Q9H2P9 285 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 ST7Q9NRC1 585 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 CYTH4Q9UIA0 394 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 SCN1AP35498 2009 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms