RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 AGPAT1Q99943 283 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 TUBB6Q9BUF5 446 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 TMEM120AQ9BXJ8 343 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 GPR88Q9GZN0 384 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 MAF1Q9H063 256 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 RANBP17Q9H2T7 1088 aaKnown RBP17.64■□□□□ 0.42
PMS1-213ENST00000441310 SAYSD1Q9NPB0 183 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 COL20A1Q9P218 1284 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 WRAP73Q9P2S5 460 aaPredicted RBP17.64■□□□□ 0.42
PMS1-213ENST00000441310 SMG5Q9UPR3 1016 aaKnown RBP17.64■□□□□ 0.42
PMS1-213ENST00000441310 MRPL11Q9Y3B7 192 aaKnown RBP17.64■□□□□ 0.42
PMS1-213ENST00000441310 FOXN3O00409 490 aaPredicted RBP17.64■□□□□ 0.41
PMS1-213ENST00000441310 TBX3O15119 743 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
PMS1-213ENST00000441310 CIB2O75838 187 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 SLITRK3O94933 977 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 GPC5P78333 572 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 CEP55Q53EZ4 464 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 C6orf163Q5TEZ5 329 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 OR6Y1Q8NGX8 325 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 RBM15Q96T37 977 aaKnown RBP eCLIP17.64■□□□□ 0.41
PMS1-213ENST00000441310 THTPAQ9BU02 230 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 RARBP10826 455 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 RGS2P41220 211 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 TMEM259Q4ZIN3 620 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 C1orf146Q5VVC0 180 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 MYCT1Q8N699 235 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 OSBPL8Q9BZF1 889 aa17.64■□□□□ 0.41
PMS1-213ENST00000441310 SMIM31A0A1B0GVY4 71 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 TMEM221A6NGB7 291 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 PIAS1O75925 651 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 ENO1P06733 434 aaKnown RBP17.63■□□□□ 0.41
PMS1-213ENST00000441310 TRIM49P0CI25 452 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 TRIM49CP0CI26 452 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 SFT2D3Q587I9 215 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 IZUMO3Q5VZ72 239 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 LPCAT4Q643R3 524 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 C12orf50Q8NA57 414 aaPredicted RBP17.63■□□□□ 0.41
PMS1-213ENST00000441310 CCDC110Q8TBZ0 833 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 CCDC97Q96F63 343 aaPredicted RBP17.63■□□□□ 0.41
PMS1-213ENST00000441310 MAK16Q9BXY0 300 aaKnown RBP17.63■□□□□ 0.41
PMS1-213ENST00000441310 VPS37BQ9H9H4 285 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 PTTG2Q9NZH5 202 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 BOLA2-SMG1P6H3BVE0 249 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 GOLGA8RI6L899 631 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 NFKBIEO00221 500 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 PIK3CDO00329 1044 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 ATP9BO43861 1147 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 SH3D19Q5HYK7 790 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 RINT1Q6NUQ1 792 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
PMS1-213ENST00000441310 ACP6Q9NPH0 428 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.63■□□□□ 0.411e-16■■■■■ 250
PMS1-213ENST00000441310 SH3GLB1Q9Y371 365 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
PMS1-213ENST00000441310 KRT4P19013 534 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 PTK6Q13882 451 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 PRKG1Q13976 671 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 B3GNT6Q6ZMB0 384 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 MICALL2Q8IY33 904 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 SLC5A5Q92911 643 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 DGCR14Q96DF8 476 aaKnown RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 FRMPD4Q14CM0 1322 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 FCHO1O14526 889 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 GMPSP49915 693 aaPredicted RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 DLG1Q12959 904 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 SIKE1Q9BRV8 207 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 WDR11Q9BZH6 1224 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 UNC45AQ9H3U1 944 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 TUBGCP4Q9UGJ1 667 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 ASTN1O14525 1302 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 PSMD10O75832 226 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CYP3A4P08684 503 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CDK4P11802 303 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 CDK16Q00536 496 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 KDSRQ06136 332 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 MTMR2Q13614 643 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CYLC2Q14093 348 aaPredicted RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 CBWD6Q4V339 395 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 SLC44A4Q53GD3 710 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CBWD3Q5JTY5 395 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CBWD5Q5RIA9 395 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 HOMEZQ8IX15 550 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 ZNF398Q8TD17 642 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 CD101Q93033 1021 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 TTC25Q96NG3 672 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 SLX1AQ9BQ83 275 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 HERPUD2Q9BSE4 406 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
PMS1-213ENST00000441310 R3HDM2Q9Y2K5 976 aaKnown RBP17.62■□□□□ 0.41
PMS1-213ENST00000441310 IPO5O00410 1097 aaKnown RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 PDXKO00764 312 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 SORBS3O60504 671 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms