RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 ODC1P11926 461 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SSTR3P32745 418 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 IRAK1P51617 712 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PHEXP78562 749 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 CCNG2Q16589 344 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 MEA1Q16626 185 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 IMPG1Q17R60 797 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FASTKD1Q53R41 847 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SPDYCQ5MJ68 293 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 DACT2Q5SW24 774 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 TTC23LQ6PF05 361 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PLEKHH3Q7Z736 793 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SRLQ86TD4 932 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PRUNE1Q86TP1 453 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FGD4Q96M96 766 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FUT8Q9BYC5 575 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SPATS2LQ9NUQ6 558 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 KLHL11Q9NVR0 708 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ARHGAP20Q9P2F6 1191 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 AK9Q5TCS8 1911 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PPFIA2O75334 1257 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ITGB3P05106 788 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FGRP09769 529 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 RARBP10826 455 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 CASP4P49662 377 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SESN2P58004 480 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 GCNT1Q02742 428 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PDCD2Q16342 344 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 EP400NLQ6ZTU2 488 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 OTOP1Q7RTM1 612 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ZNF571Q7Z3V5 609 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 EIF1ADQ8N9N8 165 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 C1orf131Q8NDD1 294 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 STKLD1Q8NE28 680 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 CLMNQ96JQ2 1002 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 DUSP9Q99956 384 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 NAT9Q9BTE0 207 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PI4K2AQ9BTU6 479 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 SPON2Q9BUD6 331 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 PRDM16Q9HAZ2 1276 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 MLXIPLQ9NP71 852 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 UBR3Q6ZT12 1888 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 GPR182O15218 404 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ATP9BO43861 1147 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 KITP10721 976 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 RFC1P35251 1148 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 AARSP49588 968 aaKnown RBP eCLIP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 HIC1Q14526 733 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 KYNUQ16719 465 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 TFDP3Q5H9I0 405 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 HP1BP3Q5SSJ5 553 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ICE2Q659A1 982 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 APOBEC3HQ6NTF7 200 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ZPBP2Q6X784 338 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 C3orf62Q6ZUJ4 267 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 RAET1EQ8TD07 263 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ASIC4Q96FT7 647 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 THOC1Q96FV9 657 aaKnown RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 C9orf72Q96LT7 481 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FAM161BQ96MY7 647 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 CBWD1Q9BRT8 395 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 TRIM45Q9H8W5 580 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-202ENST00000441024 TMBIM4Q9HC24 238 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 ARHGEF38Q9NXL2 777 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.68□□□□□ -1.342e-12■□□□□ 9.9
CNOT1-202ENST00000441024 ITGA11Q9UKX5 1188 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 DSEQ9UL01 958 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 L1RE1Q9UN81 338 aa6.68□□□□□ -1.34
CNOT1-202ENST00000441024 TMEM120BA0PK00 339 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 TTC36A6NLP5 189 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 CNTFP26441 200 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 NLRP11P59045 1033 aaKnown RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 CXCL9Q07325 125 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 PTK6Q13882 451 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 EZH2Q15910 746 aaKnown RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 TRIML2Q8N7C3 387 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 ATP8B4Q8TF62 1192 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 TFB1MQ8WVM0 346 aaKnown RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 CELF4Q9BZC1 486 aaKnown RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 MAF1Q9H063 256 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 SLC13A4Q9UKG4 626 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 VPS9D1Q9Y2B5 631 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 CCT8L1PA6NM43 557 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 ZNF197O14709 1029 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 AP5Z1O43299 807 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 SLITRK3O94933 977 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 PGM1P36871 562 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 ZNF157P51786 506 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-202ENST00000441024 IL1RL1Q01638 556 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 MTA1Q13330 715 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 ITIH4Q14624 930 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 TMTC4Q5T4D3 741 aa6.67□□□□□ -1.34
CNOT1-202ENST00000441024 C16orf89Q6UX73 402 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms