RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 ITGA11Q9UKX5 1188 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 L1RE1Q9UN81 338 aa12.51□□□□□ -0.41
UBE2D4-204ENST00000440899 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 A0A087X0B3 334 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 GOLGA8IPA6NC78 632 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 GOLGA8JA6NMD2 632 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 PRR5-ARHGAP8B1AHC4 643 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 LHX1P48742 406 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 ARHGAP8P85298 464 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 MYL7Q01449 175 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 TNK2Q07912 1038 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 BFSP1Q12934 665 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 PON2Q15165 354 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 LAIR1Q6GTX8 287 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 TMEM150AQ86TG1 271 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 CBWD1Q9BRT8 395 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 DDX43Q9NXZ2 648 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 R3HCC1Q9Y3T6 440 aaKnown RBP12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 ANK1P16157 1881 aa12.5□□□□□ -0.41
UBE2D4-204ENST00000440899 TSC2P49815 1807 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 K7ESF4 209 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 STX6O43752 255 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 PRPF6O94906 941 aaKnown RBP12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 KRT19P08727 400 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 TGM1P22735 817 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 CYP2F1P24903 491 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 PCSK1P29120 753 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 HOXA6P31267 233 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 CNR2P34972 360 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 NASPP49321 788 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 LMNB2Q03252 620 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 CCINQ13939 588 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 WDR44Q5JSH3 913 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 Q6ZS52 159 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 TOP6BLQ8N6T0 577 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 PDILTQ8N807 584 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 MRPS31Q92665 395 aaKnown RBP12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 FAM83CQ9BQN1 747 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 KIF9Q9HAQ2 790 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 SNX9Q9Y5X1 595 aa12.49□□□□□ -0.41
UBE2D4-204ENST00000440899 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 GABRDO14764 452 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 LRP3O75074 770 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 RETP07949 1114 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 ACAT1P24752 427 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 FNTBP49356 437 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 GPR15P49685 360 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 AMPD3Q01432 767 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 AMPD2Q01433 879 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 RUNX3Q13761 415 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 STK38Q15208 465 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 SURF1Q15526 300 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 LPAL2Q16609 132 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 DDR2Q16832 855 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 SOWAHAQ2M3V2 549 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 CFAP221Q4G0U5 840 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 PRR23BQ6ZRT6 265 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 LONP2Q86WA8 852 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 FUBP3Q96I24 572 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 MTMR12Q9C0I1 747 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms