RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PPFIA4O75335 1185 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PROSCO94903 275 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 STAU1O95793 577 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PAEPP09466 180 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 TPRP12270 2363 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 KCNA5P22460 613 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 EIF4BP23588 611 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 GGCXP38435 758 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 CARSP49589 748 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PEX5P50542 639 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 CLCN3P51790 818 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 WNT7BP56706 349 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 DRP2Q13474 957 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 LEXMQ3ZCV2 418 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 DUSP28Q4G0W2 176 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ZBTB41Q5SVQ8 909 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 NAA35Q5VZE5 725 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PLEKHA7Q6IQ23 1121 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 EFCAB12Q6NXP0 572 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 TAPT1Q6NXT6 567 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 DNAAF5Q86Y56 855 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 SLC13A5Q86YT5 568 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 JAMLQ86YT9 394 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 RHOT1Q8IXI2 618 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 OR5B17Q8NGF7 314 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 IFT81Q8WYA0 676 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ZBTB45Q96K62 511 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 FMO2Q99518 471 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ADPGKQ9BRR6 497 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 AP1M1Q9BXS5 423 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 KATNBL1Q9H079 304 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 MIS12Q9H081 205 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ABHD16BQ9H3Z7 469 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 XPNPEP3Q9NQH7 507 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 PARVAQ9NVD7 372 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ADAM22Q9P0K1 906 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 MTRF1LQ9UGC7 380 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
HDAC6-209ENST00000440653 C2CD2Q9Y426 696 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 NUB1Q9Y5A7 615 aa9.69□□□□□ -0.86
HDAC6-209ENST00000440653 FAM186AA6NE01 2351 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 CACNA1HO95180 2353 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 MROH7Q68CQ1 1323 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ESYT3A0FGR9 886 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 RRN3P2A6NIE6 340 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 HMGB1P1B2RPK0 211 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 TTI1O43156 1089 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 SYF2O95926 243 aaKnown RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 GAS8O95995 478 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 IVLP07476 585 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 MMP3P08254 477 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 INSRRP14616 1297 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 MMP8P22894 467 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ECHS1P30084 290 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 POLR2BP30876 1174 aaKnown RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 PTPN7P35236 360 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 TNFSF9P41273 254 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 EIF3BP55884 814 aaKnown RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 DGKDQ16760 1214 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF667Q5HYK9 610 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 DNAJC24Q6P3W2 148 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 RUFY4Q6ZNE9 571 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 KATNAL2Q8IYT4 538 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 KRT35Q92764 455 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ATOH1Q92858 354 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 LENG1Q96BZ8 264 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 RBM41Q96IZ5 413 aaKnown RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 MAML3Q96JK9 1138 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ERP44Q9BS26 406 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 BCO2Q9BYV7 579 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 TSPYL1Q9H0U9 437 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 CYP3A43Q9HB55 503 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 STARD7Q9NQZ5 370 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 WDR35Q9P2L0 1181 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 IP6K2Q9UHH9 426 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 AMACRQ9UHK6 382 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 FEZ2Q9UHY8 353 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ITGA11Q9UKX5 1188 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 AKT3Q9Y243 479 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 DERAQ9Y315 318 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 SLC4A7Q9Y6M7 1214 aa9.68□□□□□ -0.86
HDAC6-209ENST00000440653 ATRXP46100 2492 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 DMXL1Q9Y485 3027 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 CHD6Q8TD26 2715 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 UMODL1Q5DID0 1318 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ZSCAN5CA6NGD5 496 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 AGPSO00116 658 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 SHOX2O60902 331 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 RPS6KA5O75582 802 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms