RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 MDH1BQ5I0G3 518 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 TRIM59Q8IWR1 403 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 ELMOD1Q8N336 334 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 ITFG1Q8TB96 612 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 CNOT6LQ96LI5 555 aaKnown RBP19.27■□□□□ 0.68
CPSF4-205ENST00000440514 MYADMQ96S97 322 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 NIF3L1Q9GZT8 377 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 RAB20Q9NX57 234 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 HMGXB4Q9UGU5 601 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 DACH1Q9UI36 760 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 USTQ9Y2C2 406 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 A0A0C4DFX4 3053 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 PTPRDP23468 1912 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 NRG2O14511 850 aaPredicted RBP19.26■□□□□ 0.67
CPSF4-205ENST00000440514 GNA14O95837 355 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 HAPLN1P10915 354 aaPredicted RBP19.26■□□□□ 0.67
CPSF4-205ENST00000440514 ALDH1A3P47895 512 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 FMO5P49326 533 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 GPR15P49685 360 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 MARSP56192 900 aaKnown RBP19.26■□□□□ 0.67
CPSF4-205ENST00000440514 ORC1Q13415 861 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 FAM171BQ6P995 826 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 OTOP3Q7RTS5 596 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 RNF135Q8IUD6 432 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
CPSF4-205ENST00000440514 HS6ST3Q8IZP7 471 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 CCDC150Q8NCX0 1101 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 STKLD1Q8NE28 680 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 ING5Q8WYH8 240 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 BCO2Q9BYV7 579 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 HSFX1Q9UBD0 423 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 DOCK8Q8NF50 2099 aa19.26■□□□□ 0.67
CPSF4-205ENST00000440514 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
CPSF4-205ENST00000440514 FAM163BP0C2L3 166 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 CCDC192P0DO97 292 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 PTPN2P17706 415 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 CYP2F1P24903 491 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 EPHB3P54753 998 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 TPD52L1Q16890 204 aaPredicted RBP19.25■□□□□ 0.67
CPSF4-205ENST00000440514 GPR152Q8TDT2 470 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 ACSF2Q96CM8 615 aaPredicted RBP19.25■□□□□ 0.67
CPSF4-205ENST00000440514 ZNF512Q96ME7 567 aaPredicted RBP19.25■□□□□ 0.67
CPSF4-205ENST00000440514 COQ4Q9Y3A0 265 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 CUL9Q8IWT3 2517 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 NCOR1O75376 2440 aa19.25■□□□□ 0.67
CPSF4-205ENST00000440514 MYL4P12829 197 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 CEBPBP17676 345 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 PTPN1P18031 435 aaKnown RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 CD58P19256 250 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 CCR2P41597 374 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 TUFMP49411 452 aaKnown RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 NDST1P52848 882 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 CYP27A1Q02318 531 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 PRSS36Q5K4E3 855 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 SDHAF4Q5VUM1 108 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 C11orf57Q6ZUT1 292 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 PDZD4Q76G19 769 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 TMC8Q8IU68 726 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 IRF2BP1Q8IU81 584 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ZDHHC14Q8IZN3 488 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 B3GALNT2Q8NCR0 500 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 MYCBPAPQ8TBZ2 947 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 GIPC2Q8TF65 315 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 TCEAL4Q96EI5 215 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 PCED1BQ96HM7 432 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ARID3AQ99856 593 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ZNF334Q9HCZ1 680 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ABCB6Q9NP58 842 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ASAH2Q9NR71 780 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 MUTYHQ9UIF7 546 aa19.24■□□□□ 0.67
CPSF4-205ENST00000440514 MRPS23Q9Y3D9 190 aaKnown RBP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.24■□□□□ 0.67
CPSF4-205ENST00000440514 ASGR2P07307 311 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 VEPH1Q14D04 833 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 MAPRE1Q15691 268 aaKnown RBP19.23■□□□□ 0.67
CPSF4-205ENST00000440514 DDR2Q16832 855 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 CFAP221Q4G0U5 840 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 HSP90AA4PQ58FG1 418 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 WDR44Q5JSH3 913 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 SASS6Q6UVJ0 657 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 C4orf50Q6ZRC1 276 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 CREBRFQ8IUR6 639 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 NPAS3Q8IXF0 933 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 ST13P5Q8NFI4 369 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-205ENST00000440514 FGF13Q92913 245 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 TATDN2Q93075 761 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 PSMG2Q969U7 264 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 FUBP3Q96I24 572 aaKnown RBP eCLIP19.23■□□□□ 0.67
CPSF4-205ENST00000440514 TWNKQ96RR1 684 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 LRRC3Q9BY71 257 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 MAGEC2Q9UBF1 373 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-205ENST00000440514 LIMD1Q9UGP4 676 aa19.23■□□□□ 0.67
CPSF4-205ENST00000440514 BDP1A6H8Y1 2624 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 AFPP02771 609 aaKnown RBP19.22■□□□□ 0.67
CPSF4-205ENST00000440514 GJA1P17302 382 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms