RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF852Q6ZMS4 543 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 TRAPPC11Q7Z392 1133 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 FSIP1Q8NA03 581 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 CXorf38Q8TB03 319 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 CCDC34Q96HJ3 373 aa21.29■■□□□ 1
SHROOM1-204ENST00000440118 MAGED2Q9UNF1 606 aaPredicted RBP21.29■■□□□ 1
SHROOM1-204ENST00000440118 GFRA3O60609 400 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 CD72P21854 359 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 NDUFA8P51970 172 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 RPL10AP62906 217 aaKnown RBP21.28■■□□□ 1
SHROOM1-204ENST00000440118 CYP4F8P98187 520 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 BIRC3Q13489 604 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 GAREM2Q75VX8 874 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 OSTM1Q86WC4 334 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 C12orf56Q8IXR9 622 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 CSGALNACT1Q8TDX6 532 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 TRPV4Q9HBA0 871 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 TMLHEQ9NVH6 421 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 GTF3C4Q9UKN8 822 aa21.28■■□□□ 1
SHROOM1-204ENST00000440118 ZFHX2Q9C0A1 2572 aaPredicted RBP21.27■■□□□ 1
SHROOM1-204ENST00000440118 FAM170BA6NMN3 283 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 NCAM2O15394 837 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 KLRC4O43908 158 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 KIF20AO95235 890 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 RPN1P04843 607 aaKnown RBP21.27■■□□□ 1
SHROOM1-204ENST00000440118 STK4Q13043 487 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SOWAHAQ2M3V2 549 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SCARA3Q6AZY7 606 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 C4orf50Q6ZRC1 276 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 DPH6Q7L8W6 267 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 GPIHBP1Q8IV16 184 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 ARID3BQ8IVW6 561 aaPredicted RBP21.27■■□□□ 1
SHROOM1-204ENST00000440118 MFSD6LQ8IWD5 586 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SCN4BQ8IWT1 228 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 KIAA0895Q8NCT3 520 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SYT15Q9BQS2 421 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SNX25Q9H3E2 840 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 ABCB6Q9NP58 842 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 LTB4R2Q9NPC1 389 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 SPATA6Q9NWH7 488 aaPredicted RBP21.27■■□□□ 1
SHROOM1-204ENST00000440118 HPSEQ9Y251 543 aa21.27■■□□□ 1
SHROOM1-204ENST00000440118 PATJQ8NI35 1801 aa21.27■□□□□ 0.99
SHROOM1-204ENST00000440118 LRRN2O75325 713 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 CSH1P0DML2 217 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 CSH2P0DML3 217 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 CYP2F1P24903 491 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 GPR15P49685 360 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 PSMC1P62191 440 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 MAPRE1Q15691 268 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 FRMD5Q7Z6J6 570 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 NELL2Q99435 816 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 DDX23Q9BUQ8 820 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 TASP1Q9H6P5 420 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 GDPD2Q9HCC8 539 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 PIAS3Q9Y6X2 628 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 F5P12259 2224 aa21.26■□□□□ 0.99
SHROOM1-204ENST00000440118 GOLGA6L4A6NEF3 574 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 MAN2B1O00754 1011 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 HCRTO43612 131 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 COL4A2P08572 1712 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 AVPR1AP37288 418 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 DDR2Q16832 855 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 SDHAF4Q5VUM1 108 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 C1orf210Q8IVY1 113 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 STKLD1Q8NE28 680 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 MRPS31Q92665 395 aaKnown RBP21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 UXTQ9UBK9 157 aaPredicted RBP21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 ZMYM5Q9UJ78 669 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 CDH9Q9ULB4 789 aa21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 NDRG2Q9UN36 371 aaKnown RBP21.25■□□□□ 0.99
SHROOM1-204ENST00000440118 CACNA1IQ9P0X4 2223 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 PTPRDP23468 1912 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 A0A1W2PQ27 194 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 A0A1W2PQ64 194 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 A0A1W2PQD8 194 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 GABRDO14764 452 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 CALUO43852 315 aaPredicted RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 NR3C1P04150 777 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 PDGFRBP09619 1106 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 TARSP26639 723 aaKnown RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 NBL1P41271 181 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 MAGEA9P43362 315 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 CYP27A1Q02318 531 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 WDR72Q3MJ13 1102 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 CEP135Q66GS9 1140 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 OR6B3Q8NGW1 331 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 KBTBD7Q8WVZ9 684 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 NKD2Q969F2 451 aaPredicted RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 MYLPFQ96A32 169 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 FUBP3Q96I24 572 aaKnown RBP eCLIP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 OSBPL6Q9BZF3 934 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 MAGEC2Q9UBF1 373 aaPredicted RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 NXF1Q9UBU9 619 aaKnown RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 FRMD4BQ9Y2L6 1034 aa21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 MTF2Q9Y483 593 aaPredicted RBP21.24■□□□□ 0.99
SHROOM1-204ENST00000440118 MYBPHLA2RUH7 354 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 LAMTOR5O43504 91 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 PRR29P0C7W0 189 aa21.23■□□□□ 0.99
SHROOM1-204ENST00000440118 WARSP23381 471 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms