RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PTPN7P35236 360 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 PSMC1P62191 440 aaKnown RBP12.44□□□□□ -0.42
SMAD3-202ENST00000439724 MRPS6P82932 125 aaKnown RBP12.44□□□□□ -0.42
SMAD3-202ENST00000439724 PDCLQ13371 301 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 LCLAT1Q6UWP7 414 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 SYDE1Q6ZW31 735 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-202ENST00000439724 TMC3Q7Z5M5 1100 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 UNC93AQ86WB7 457 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 CCDC50Q8IVM0 306 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA6L1Q8N7Z2 621 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-202ENST00000439724 MCRS1Q96EZ8 462 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 FMO2Q99518 471 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 HERPUD2Q9BSE4 406 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 OSBPL8Q9BZF1 889 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 DCLK3Q9C098 648 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 MIS12Q9H081 205 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 DDX56Q9NY93 547 aaKnown RBP12.44□□□□□ -0.42
SMAD3-202ENST00000439724 PSD3Q9NYI0 1048 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 GRHL1Q9NZI5 618 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 GABRQQ9UN88 632 aa12.44□□□□□ -0.42
SMAD3-202ENST00000439724 SMIM28A0A1B0GU29 152 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 F8VP50 259 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 PIRO00625 290 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SEPT4O43236 478 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 PPFIA2O75334 1257 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SETSIPP0DME0 302 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 RALAP11233 206 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 CYP3A5P20815 502 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 PNPLA4P41247 253 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
SMAD3-202ENST00000439724 FLT3LGP49771 235 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 COPS2P61201 443 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 GNASQ5JWF2 1037 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 GLRA4Q5JXX5 417 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 ZDHHC24Q6UX98 284 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 POLNQ7Z5Q5 900 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
SMAD3-202ENST00000439724 GRK7Q8WTQ7 553 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 C18orf25Q96B23 403 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-202ENST00000439724 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SLITRK1Q96PX8 696 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
SMAD3-202ENST00000439724 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 TXLNGYQ9BZA5 131 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 ARHGAP39Q9C0H5 1083 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 TJP2Q9UDY2 1190 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 IPPQ9Y573 584 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 TRPV2Q9Y5S1 764 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 SNX9Q9Y5X1 595 aa12.43□□□□□ -0.42
SMAD3-202ENST00000439724 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 TMEM88BA6NKF7 163 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 M0QZ92 97 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 KRT1P04264 644 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 TCF4P15884 667 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 AKAP5P24588 427 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 PSMA2P25787 234 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RFC1P35251 1148 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 GJC1P36383 396 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 FLT3P36888 993 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 HSD17B3P37058 310 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 NFX1Q12986 1120 aaKnown RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 ACAP1Q15027 740 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 UAP1Q16222 522 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 CCNG2Q16589 344 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 FBXO47Q5MNV8 452 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RPAINQ86UA6 219 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 SMG8Q8ND04 991 aaKnown RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 JOSD2Q8TAC2 188 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 C1orf54Q8WWF1 131 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 ZBTB9Q96C00 473 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 METTL5Q9NRN9 209 aaKnown RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 FEZ2Q9UHY8 353 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 PFKMP08237 780 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RARBP10826 455 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 KCNJ1P48048 391 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 GYS2P54840 703 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 KRT17Q04695 432 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 DMTNQ08495 405 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 PTK6Q13882 451 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA7BQ2TAP0 167 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 NBPF20Q3BBV1 942 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms