RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CDC25CP30307 473 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 AFMP43652 599 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 MYL7Q01449 175 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 CUL4BQ13620 913 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 SNRNP35Q16560 246 aaKnown RBP21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 BMT2Q1RMZ1 405 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 INTS6LQ5JSJ4 861 aaKnown RBP21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 GPIHBP1Q8IV16 184 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 WDR49Q8IV35 697 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 NELFCDQ8IXH7 590 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 HPDLQ96IR7 371 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 SPATA6Q9NWH7 488 aaPredicted RBP21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 OBP2AQ9NY56 170 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 PIAS3Q9Y6X2 628 aa21.81■■□□□ 1.08
NCKIPSD-206ENST00000439518 PRAMEF12O95522 483 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 SLFN14P0C7P3 912 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 LHX1P48742 406 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 MLLT6P55198 1093 aaPredicted RBP21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 CYP4F8P98187 520 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 MYO1EQ12965 1108 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 DPH6Q7L8W6 267 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 TMEM150AQ86TG1 271 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 YAF2Q8IY57 180 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 GRAMD1CQ8IYS0 662 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 PI4K2AQ9BTU6 479 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 SLC39A2Q9NP94 309 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 GTF3C4Q9UKN8 822 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 FBXO4Q9UKT5 387 aa21.8■■□□□ 1.08
NCKIPSD-206ENST00000439518 TICRRQ7Z2Z1 1910 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 CLIC2O15247 247 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 LAMTOR5O43504 91 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 HCRTO43612 131 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 PRPF40AO75400 957 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 F11P03951 625 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 PCSK1P29120 753 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 CYP2J2P51589 502 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 PSMD6Q15008 389 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 TAF12Q16514 161 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 CCDC142Q17RM4 750 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 ZNF528Q3MIS6 628 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 HS2ST1Q7LGA3 356 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 TRAPPC11Q7Z392 1133 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 C12orf56Q8IXR9 622 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 XXYLT1Q8NBI6 393 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 RDH13Q8NBN7 331 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 KBTBD7Q8WVZ9 684 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 GCNAQ96QF7 691 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 SLC46A2Q9BY10 475 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 GZF1Q9H116 711 aaPredicted RBP21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 CGNQ9P2M7 1197 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 SERTAD1Q9UHV2 236 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 NDRG2Q9UN36 371 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 ZDHHC9Q9Y397 364 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 R3HCC1Q9Y3T6 440 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 GPR179Q6PRD1 2367 aa21.79■■□□□ 1.08
NCKIPSD-206ENST00000439518 PATJQ8NI35 1801 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 NUP210Q8TEM1 1887 aaPredicted RBP21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 ACTN4O43707 911 aaKnown RBP21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 KLRC4O43908 158 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 CYP2F1P24903 491 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 GPR15P49685 360 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 NLRP12P59046 1061 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 CYP24A1Q07973 514 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 KNOP1Q1ED39 458 aaKnown RBP21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 CFAP221Q4G0U5 840 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 ZC3H14Q6PJT7 736 aaKnown RBP21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 CEP57L1Q8IYX8 460 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 FAM3CQ92520 227 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 ZMYM5Q9UJ78 669 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 FANCMQ8IYD8 2048 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 OTOGLQ3ZCN5 2332 aa21.78■■□□□ 1.08
NCKIPSD-206ENST00000439518 MYBPHLA2RUH7 354 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 DPYSL4O14531 572 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CST3P01034 146 aaPredicted RBP21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 LMNAP02545 664 aaKnown RBP21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CSH1P0DML2 217 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CSH2P0DML3 217 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 DLATP10515 647 aaKnown RBP21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CMA1P23946 247 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 RPL10AP62906 217 aaKnown RBP21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 DDR2Q16832 855 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 ARHGAP29Q52LW3 1261 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 SDHAF4Q5VUM1 108 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 FAM171BQ6P995 826 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 ADSSL1Q8N142 457 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CSGALNACT1Q8TDX6 532 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 PAGE5Q96GU1 130 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 FUBP3Q96I24 572 aaKnown RBP eCLIP21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 CGRRF1Q99675 332 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
NCKIPSD-206ENST00000439518 FRYLO94915 3013 aa21.77■■□□□ 1.07
NCKIPSD-206ENST00000439518 ATP2C2O75185 946 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 NOL4O94818 638 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 CCNE1P24864 410 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 LMO2P25791 158 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 CSTF1Q05048 431 aaKnown RBP21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 MTAPQ13126 283 aa21.76■■□□□ 1.07
NCKIPSD-206ENST00000439518 MAMSTRQ6ZN01 415 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms