RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 GIPC1O14908 333 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 DCLK1O15075 740 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ARSAP15289 507 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 NEK4P51957 841 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ZNF131P52739 623 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 COL9A2Q14055 689 aaPredicted RBP8.53□□□□□ -1.04
LINC00578-201ENST00000439009 BECN1Q14457 450 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 MGAT5BQ3V5L5 792 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ARSHQ5FYA8 562 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 SH3PXD2AQ5TCZ1 1133 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 TXNDC8Q6A555 127 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 TRIM68Q6AZZ1 485 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 JADE1Q6IE81 842 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 THEM5Q8N1Q8 247 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 MAB21L3Q8N8X9 362 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 CCDC26Q8TAB7 109 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 GIPC2Q8TF65 315 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ACDQ96AP0 544 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
LINC00578-201ENST00000439009 MYRFLQ96LU7 910 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 HHIPQ96QV1 700 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 SEPT5Q99719 369 aaPredicted RBP8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ASB7Q9H672 318 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 ECT2Q9H8V3 914 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
LINC00578-201ENST00000439009 LIMCH1Q9UPQ0 1083 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 C2CD2Q9Y426 696 aa8.53□□□□□ -1.04
LINC00578-201ENST00000439009 CYB561D2O14569 222 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 SLC26A4O43511 780 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 NFICP08651 508 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CSH1P0DML2 217 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CSH2P0DML3 217 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TCF3P15923 654 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 MATR3P43243 847 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 LIG4P49917 911 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CREB5Q02930 508 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 RAD51AP2Q09MP3 1159 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 BFSP1Q12934 665 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 DMC1Q14565 340 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TMEM132DQ14C87 1099 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 ZNF77Q15935 545 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TAF12Q16514 161 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TMEM119Q4V9L6 283 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 USP39Q53GS9 565 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 WSCD1Q658N2 575 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 NAIF1Q69YI7 327 aaPredicted RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CC2D1AQ6P1N0 951 aaPredicted RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 SLC39A4Q6P5W5 647 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 DCP1BQ8IZD4 617 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CPA6Q8N4T0 437 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 KIAA1958Q8N8K9 716 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 RPLP0P6Q8NHW5 317 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 LEO1Q8WVC0 666 aaPredicted RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 OSCP1Q8WVF1 389 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 MRPS31Q92665 395 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 CD101Q93033 1021 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TMEM206Q9H813 350 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 TMEM9BQ9NQ34 198 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 EVLQ9UI08 416 aaPredicted RBP8.52□□□□□ -1.05
LINC00578-201ENST00000439009 ODF2LQ9ULJ1 636 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 STYXL1Q9Y6J8 313 aa8.52□□□□□ -1.05
LINC00578-201ENST00000439009 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 NPHP3-ACAD11A0A0J9YXS1 232 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 FAM221BA6H8Z2 402 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 SRRM3A6NNA2 597 aaPredicted RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 UPK3BL1B0FP48 263 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 UPK3BL2E5RIL1 263 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 HNRNPDLO14979 420 aaKnown RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 TADA3O75528 432 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 NOL4O94818 638 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 PLA2G4BP0C869 781 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 CHRM1P11229 460 aaPredicted RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 NMT1P30419 496 aaKnown RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 ABCD1P33897 745 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 TAF6P49848 677 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 ATP2C1P98194 919 aaPredicted RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 GTF2BQ00403 316 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 FAM160A1Q05DH4 1040 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 USP4Q13107 963 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 MTF1Q14872 753 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 NFE2Q16621 373 aaPredicted RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 EML3Q32P44 896 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 USP33Q8TEY7 942 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 ATP2A3Q93084 1043 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 BICD1Q96G01 975 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 CNOT6LQ96LI5 555 aaKnown RBP8.51□□□□□ -1.05
LINC00578-201ENST00000439009 FIZ1Q96SL8 496 aa8.51□□□□□ -1.05
LINC00578-201ENST00000439009 PKMYT1Q99640 499 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms