RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KLHL11Q9NVR0 708 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 PARP2Q9UGN5 583 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 GINS2Q9Y248 185 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 R3HDM2Q9Y2K5 976 aaKnown RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 NRCAMQ92823 1304 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TRIP12Q14669 1992 aaPredicted RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 RPSAP08865 295 aaKnown RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 NUDT17P0C025 328 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 RALAP11233 206 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TBXAS1P24557 533 aaPredicted RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 PSEN2P49810 448 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 AP3M2P53677 418 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TFAMQ00059 246 aaKnown RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 CALCOCO2Q13137 446 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 WLSQ5T9L3 541 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 LIN9Q5TKA1 542 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 HOOK3Q86VS8 718 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TRPV1Q8NER1 839 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 DNAJC17Q9NVM6 304 aaKnown RBP14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
PTCHD3-201ENST00000438700 TSPAN1O60635 241 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 PROSCO94903 275 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 SLC1A1P43005 524 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 MYL6P60660 151 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 HIC1Q14526 733 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 SURF1Q15526 300 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 DUOXA2Q1HG44 320 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 SCARA5Q6ZMJ2 495 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 ZNF410Q86VK4 478 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 EPS8L3Q8TE67 593 aaKnown RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 ZNF606Q8WXB4 792 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 ART4Q93070 314 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 TBC1D31Q96DN5 1066 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 RPF1Q9H9Y2 349 aaKnown RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 TLR3O15455 904 aaKnown RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 MCF2P10911 925 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 AKR1A1P14550 325 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 LACTBP83111 547 aaPredicted RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 FSCN1Q16658 493 aaKnown RBP14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 SPDYCQ5MJ68 293 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 CPLX4Q7Z7G2 160 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 CACNA2D3Q8IZS8 1091 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 SGSM3Q96HU1 749 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 GGA2Q9UJY4 613 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 Q9Y3F1 56 aa14.67□□□□□ -0.06
PTCHD3-201ENST00000438700 MBLAC1A4D2B0 266 aaPredicted RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 HAS3O00219 553 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TP73O15350 636 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 RIPK2O43353 540 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 AOC2O75106 756 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TMEM191BP0C7N4 346 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 STAG3L1P0CL83 205 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 CYP2C9P11712 490 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 GBP1P32455 592 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 ACCSLQ4AC99 568 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 ZFYVE27Q5T4F4 411 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 ANKS1BQ7Z6G8 1248 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TRIB2Q92519 343 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 CCT6BQ92526 530 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 RUNDC3BQ96NL0 473 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 B4GALT4O60513 344 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 ASS1P00966 412 aaKnown RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 WEE2P0C1S8 567 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TCF4P15884 667 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 FLT3LGP49771 235 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TRIM72Q6ZMU5 477 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 TLCD1Q96CP7 247 aa14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 MRPL47Q9HD33 250 aaKnown RBP14.66□□□□□ -0.06
PTCHD3-201ENST00000438700 MYADML2A6NDP7 307 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ACSL3O95573 720 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ALDH1A1P00352 501 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 DRD4P21917 467 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 IFI35P80217 286 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ZNF200P98182 395 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 PTP4A2Q12974 167 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ATP13A4Q4VNC1 1196 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 PLEKHA7Q6IQ23 1121 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 PHF13Q86YI8 300 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 TMEM130Q8N3G9 435 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 MIEF2Q96C03 454 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 DCLK3Q9C098 648 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ACTR5Q9H9F9 607 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 SMIM35A0A1B0GVV1 85 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 RGS16O15492 202 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 GPR32O75388 356 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 IL18RAPO95256 599 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 TNNC2P02585 160 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 NFICP08651 508 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 CYBAP13498 195 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 RARGP13631 454 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms